RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 OR10W1Q8NGF6 305 aa12.52□□□□□ -0.41
CCDC40-202ENST00000374876 PYGO2Q9BRQ0 406 aa12.52□□□□□ -0.41
CCDC40-202ENST00000374876 NIT2Q9NQR4 276 aa12.52□□□□□ -0.41
CCDC40-202ENST00000374876 ZANQ9Y493 2812 aa12.51□□□□□ -0.41
CCDC40-202ENST00000374876 PPP5D1E7EU14 171 aa12.51□□□□□ -0.41
CCDC40-202ENST00000374876 RNASE2P10153 161 aaKnown RBP12.51□□□□□ -0.41
CCDC40-202ENST00000374876 ERHP84090 104 aaKnown RBP12.51□□□□□ -0.41
CCDC40-202ENST00000374876 VSTM2AQ8TAG5 236 aa12.51□□□□□ -0.41
CCDC40-202ENST00000374876 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
CCDC40-202ENST00000374876 ELOVL1Q9BW60 279 aa12.51□□□□□ -0.41
CCDC40-202ENST00000374876 GSX1Q9H4S2 264 aaPredicted RBP12.51□□□□□ -0.41
CCDC40-202ENST00000374876 NDUFA4L2Q9NRX3 87 aa12.51□□□□□ -0.41
CCDC40-202ENST00000374876 GAR1Q9NY12 217 aaKnown RBP12.51□□□□□ -0.41
CCDC40-202ENST00000374876 SLC45A2Q9UMX9 530 aa12.51□□□□□ -0.41
CCDC40-202ENST00000374876 CSPG4Q6UVK1 2322 aa12.51□□□□□ -0.41
CCDC40-202ENST00000374876 A0A1W2PPQ1 181 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 IGHV2-70P01814 119 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 LINC00869P0C866 280 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 SRP14P37108 136 aaKnown RBP12.5□□□□□ -0.41
CCDC40-202ENST00000374876 DIAPH2-AS1Q14236 149 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 GAMTQ14353 236 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 FAM78BQ5VT40 261 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 MOB3BQ86TA1 216 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 OR4P4Q8NGL7 312 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 ZNF596Q8TC21 504 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 YTHDF2Q9Y5A9 579 aaKnown RBP12.5□□□□□ -0.41
CCDC40-202ENST00000374876 ELOA3CA0A087WX78 387 aaPredicted RBP12.5□□□□□ -0.41
CCDC40-202ENST00000374876 IFITM10A6NMD0 228 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 FOXH1O75593 365 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 ACTL6BO94805 426 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 CHRNA7P36544 502 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 TMEM155Q4W5P6 130 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 KCNIP4Q6PIL6 250 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 TGIF2LXQ8IUE1 241 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 OR4A5Q8NH83 315 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 OR9G1Q8NH87 305 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 SLC35E1Q96K37 410 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 AURKAIP1Q9NWT8 199 aaPredicted RBP12.5□□□□□ -0.41
CCDC40-202ENST00000374876 WASHC3Q9Y3C0 194 aa12.5□□□□□ -0.41
CCDC40-202ENST00000374876 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 PHOX2AO14813 284 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 DLX6P56179 175 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 Q71RC1 249 aaPredicted RBP12.49□□□□□ -0.41
CCDC40-202ENST00000374876 OR2T10Q8NGZ9 312 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 TMEM167AQ8TBQ9 72 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 PCGF1Q9BSM1 259 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 IGKV1OR2-108A0A075B7D4 117 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 A0A1W2PN81 502 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 IGHV1-8P0DP01 117 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 FOSL1P15407 271 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 OR10J1P30954 320 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 LMO4P61968 165 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 MIR17HGQ75NE6 70 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 OR4X1Q8NH49 305 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 ST6GALNAC6Q969X2 333 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 FUT9Q9Y231 359 aa12.49□□□□□ -0.41
CCDC40-202ENST00000374876 ABCA1O95477 2261 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 A0A087X0M5 115 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 A0A1B0GX30 115 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 IL3RAP26951 378 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 FAM3BP58499 235 aaPredicted RBP12.48□□□□□ -0.41
CCDC40-202ENST00000374876 CD69Q07108 199 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 MLANAQ16655 118 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 GFI1BQ5VTD9 330 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 UHRF2Q96PU4 802 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 SVEP1Q4LDE5 3571 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 TEP1Q99973 2627 aaKnown RBP12.48□□□□□ -0.41
CCDC40-202ENST00000374876 TNCP24821 2201 aa12.48□□□□□ -0.41
CCDC40-202ENST00000374876 TRBV23-1A0A0A0MS06 115 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 PGPEP1LA6NFU8 196 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 GGCTO75223 188 aaKnown RBP12.47□□□□□ -0.41
CCDC40-202ENST00000374876 LY6G6DO95868 133 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 MC5RP33032 325 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 ZNF137PP52743 207 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 PDZD11Q5EBL8 140 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 HIST3H2BBQ8N257 126 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 CACNG8Q8WXS5 425 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 MDFIC2A0A1B0GVS7 189 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 INS-IGF2F8WCM5 200 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 IGHV4-31P0DP07 118 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 GATA2P23769 480 aaPredicted RBP12.47□□□□□ -0.41
CCDC40-202ENST00000374876 GPX4P36969 197 aaPredicted RBP12.47□□□□□ -0.41
CCDC40-202ENST00000374876 PSG5Q15238 335 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 HLA-DRB5Q30154 266 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 VMA21Q3ZAQ7 101 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 SFRP2Q96HF1 295 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 C19orf24Q9BVV8 132 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 GPR61Q9BZJ8 451 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 LPAR2Q9HBW0 351 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 TMEM167BQ9NRX6 74 aa12.47□□□□□ -0.41
CCDC40-202ENST00000374876 TECRQ9NZ01 308 aaKnown RBP12.47□□□□□ -0.41
CCDC40-202ENST00000374876 TRBV20OR9-2A0A075B6H5 130 aa12.46□□□□□ -0.41
CCDC40-202ENST00000374876 E7EUB6 86 aa12.46□□□□□ -0.41
CCDC40-202ENST00000374876 IGLV2-23P01705 113 aa12.46□□□□□ -0.41
CCDC40-202ENST00000374876 FABP1P07148 127 aa12.46□□□□□ -0.41
CCDC40-202ENST00000374876 KRTAP1-1Q07627 177 aa12.46□□□□□ -0.41
CCDC40-202ENST00000374876 ACY3Q96HD9 319 aa12.46□□□□□ -0.41
CCDC40-202ENST00000374876 ZNF430Q9H8G1 570 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms