RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 PPIAL4CA0A0B4J2A2 164 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 C7orf71A4D174 169 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 PPIAL4DF5H284 164 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 PPIAL4FP0DN26 164 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 RAB31Q13636 194 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 Q8IYB0 196 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 C5orf17Q8NAS9 161 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 SMRP1Q8NCR6 262 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 OR4S2Q8NH73 311 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 LOXL2Q9Y4K0 774 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 DSCAMO60469 2012 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 A0A096LNJ9 63 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 A0A1W2PRE2 83 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 CCL4P13236 92 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 SPINK14Q6IE38 97 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 ACP7Q6ZNF0 438 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 SGK494Q96LW2 274 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 RTL8AQ9BWD3 113 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 ZNF331Q9NQX6 463 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 PATE2Q6UY27 113 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 OR4A16Q8NH70 328 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 SVIPQ8NHG7 77 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 H1FXQ92522 213 aaKnown RBP9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 LEAP2Q969E1 77 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 GRAMD2BQ96HH9 432 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 POLDIP2Q9Y2S7 368 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 RAI1Q7Z5J4 1906 aaPredicted RBP9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 SRRM4A7MD48 611 aaKnown RBP9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 GNG5P63218 68 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 LINC01545Q5VT33 79 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 NINJ1Q92982 152 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 MLST8Q9BVC4 326 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 DCHS2Q6V1P9 2916 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 ADGRG4Q8IZF6 3080 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 M0R1X1 148 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 FAM106CPP0CH98 169 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 SMIM21Q3B7S5 101 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 PRSS57Q6UWY2 283 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 WDR82Q6UXN9 313 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 DUSP13Q9UII6 198 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 FOXA2Q9Y261 457 aaPredicted RBP9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 E7EUB6 86 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 OR7C2O60412 319 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 CIDEAO60543 219 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 TRAT1Q6PIZ9 186 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 SMIM12Q96EX1 92 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 TMEM167BQ9NRX6 74 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 NAV3Q8IVL0 2385 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 CYC1P08574 325 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 SP9P0CG40 484 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 COX8AP10176 69 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 PAX2Q02962 417 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 ATMQ13315 3056 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 K7ERU9 68 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 GPR183P32249 361 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 PPP1R32Q7Z5V6 425 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 OR1N2Q8NGR9 330 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 PRR7Q8TB68 274 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 ZNF430Q9H8G1 570 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 C12orf54Q6X4T0 127 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 NEU4Q8WWR8 484 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 SRFP11831 508 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 GABRA6Q16445 453 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 SPRNQ5BIV9 151 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 ITLN1Q8WWA0 313 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 GCM1Q9NP62 436 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 C19orf71A6NCJ1 209 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 MGST3O14880 152 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 LEPROTL1O95214 131 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 MT-CO2P00403 227 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 MRPL49Q13405 166 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 OR4A5Q8NH83 315 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 MRPL36Q9P0J6 103 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 PEF1Q9UBV8 284 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 IQCF6A8MYZ5 107 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 GPR12P47775 334 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 ADAMTSL5Q6ZMM2 481 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 CHRDL1Q9BU40 450 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 AMMECR1Q9Y4X0 333 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 IGKV1D-37A0A075B6S9 117 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 CD46P15529 392 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 LOXL1Q08397 574 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 CHCHD1Q96BP2 118 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 IGKV1D-17A0A075B6S4 117 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 HSBP1L1C9JCN9 74 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 IGKV1-16P04430 117 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 APOBEC3AP31941 199 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 C16orf54Q6UWD8 224 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 OR10W1Q8NGF6 305 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 TRIB1Q96RU8 372 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 C12orf49Q9H741 205 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 ZNRD1Q9P1U0 126 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 RABAC1Q9UI14 185 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 C9orf118A6NHY6 69 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms