RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 WASHC3Q9Y3C0 194 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 A0A087X0M5 115 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 A0A1B0GX30 115 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 GGTLC3B5MD39 225 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 SUB1P53999 127 aaKnown RBP eCLIP12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 LGALS4P56470 323 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 WT1-ASQ06250 92 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 MMD2Q8IY49 270 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 DYNLRB1Q9NP97 96 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 ZNF835Q9Y2P0 537 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 V9GYV3 84 aa12.19□□□□□ -0.46
TNFSF13-201ENST00000338784 PSMB11A5LHX3 300 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 IGLV2-23P01705 113 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 PAX1P15863 534 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 CBLN1P23435 193 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 LOXP28300 417 aaPredicted RBP12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 SUMO1P63165 101 aaKnown RBP12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 TIGITQ495A1 244 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 TGIF2LXQ8IUE1 241 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 TMEM256Q8N2U0 113 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 WFIKKN1Q96NZ8 548 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 ZNF430Q9H8G1 570 aaPredicted RBP12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 DNAJC4Q9NNZ3 241 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 KAAG1Q9UBP8 84 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 BSNQ9UPA5 3926 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 CGB1A6NKQ9 187 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 ZNF137PP52743 207 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 DLX6P56179 175 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 SELENOTP62341 195 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 ZNF664Q8N3J9 261 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 SLC25A2Q9BXI2 301 aa12.18□□□□□ -0.46
TNFSF13-201ENST00000338784 YLPM1P49750 1951 aaKnown RBP12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 MC5RP33032 325 aa12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 IQCJQ1A5X6 159 aa12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 VMA21Q3ZAQ7 101 aa12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 TMEM155Q4W5P6 130 aa12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 C10orf55Q5SWW7 151 aa12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 REC114Q7Z4M0 266 aa12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 OR1L6Q8NGR2 347 aa12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 FAM167A-AS1Q96KT0 104 aa12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 NOL4LQ96MY1 436 aaPredicted RBP12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
TNFSF13-201ENST00000338784 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 OR1L4Q8NGR5 311 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 TRAV5A0A0B4J249 113 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 GRIFINA4D1Z8 144 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 E7EQL1 145 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 FCN1O00602 326 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 NUPR1O60356 82 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 COX7A2P2O60397 106 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 IGHV1-8P0DP01 117 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 PPOXP50336 477 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 SSBP2P81877 361 aaPredicted RBP12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 RPL19P84098 196 aaKnown RBP12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 SSX2Q16385 188 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 MORN5Q5VZ52 161 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 OR8I2Q8N0Y5 310 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 OR5AU1Q8NGC0 362 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 NPIPB3Q92617 1050 aa12.16□□□□□ -0.46
TNFSF13-201ENST00000338784 TNCP24821 2201 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 GCN1Q92616 2671 aaKnown RBP12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 TRBV9A0A0B4J1U6 114 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 TCRBV4S1A1TA0A5B7 111 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 A8MWP6 167 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 ISLRO14498 428 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 SLC25A17O43808 307 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 IER3P46695 156 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 LGALS7P47929 136 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 C10orf113Q5VZT2 155 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 DMRTC2Q8IXT2 367 aaPredicted RBP12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 CMTM2Q8TAZ6 248 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 IGF2BP2-AS1Q96M15 143 aa12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 RNASE7Q9H1E1 156 aaKnown RBP12.15□□□□□ -0.46
TNFSF13-201ENST00000338784 IGHV1-69-2A0A0G2JMI3 117 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 SNURFLB1AK76 121 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 CRISP2P16562 243 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 GNB1LQ9BYB4 327 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 ENSAO43768 121 aaKnown RBP12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 SCGB1D1O95968 90 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 CX3CL1P78423 397 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 THAP8Q8NA92 274 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 RITA1Q96K30 269 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 MS4A10Q96PG2 267 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 TMEM133Q9H2Q1 129 aa12.14□□□□□ -0.47
TNFSF13-201ENST00000338784 IGKV1D-37A0A075B6S9 117 aa12.13□□□□□ -0.47
TNFSF13-201ENST00000338784 A0A1W2PPI3 338 aa12.13□□□□□ -0.47
TNFSF13-201ENST00000338784 IGHV3-48P01763 117 aa12.13□□□□□ -0.47
TNFSF13-201ENST00000338784 MGST1P10620 155 aaKnown RBP12.13□□□□□ -0.47
TNFSF13-201ENST00000338784 APOBEC3AP31941 199 aaPredicted RBP12.13□□□□□ -0.47
TNFSF13-201ENST00000338784 TAS2R60P59551 318 aa12.13□□□□□ -0.47
TNFSF13-201ENST00000338784 FXYD3Q14802 87 aa12.13□□□□□ -0.47
TNFSF13-201ENST00000338784 TM4SF20Q53R12 229 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms