RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NBASA2RRP1 2371 aa14.01□□□□□ -0.17
DDX28-201ENST00000332395 BUB1B-PAK6H3BSN5 160 aa14.01□□□□□ -0.17
DDX28-201ENST00000332395 LY6HO94772 140 aa14.01□□□□□ -0.17
DDX28-201ENST00000332395 RBP4P02753 201 aa14.01□□□□□ -0.17
DDX28-201ENST00000332395 SUB1P53999 127 aaKnown RBP eCLIP14.01□□□□□ -0.17
DDX28-201ENST00000332395 C8orf46Q8TAG6 207 aa14.01□□□□□ -0.17
DDX28-201ENST00000332395 ELOVL1Q9BW60 279 aa14.01□□□□□ -0.17
DDX28-201ENST00000332395 A0A1W2PPI3 338 aa14□□□□□ -0.17
DDX28-201ENST00000332395 PNKDQ8N490 385 aa14□□□□□ -0.17
DDX28-201ENST00000332395 AURKAIP1Q9NWT8 199 aaPredicted RBP14□□□□□ -0.17
DDX28-201ENST00000332395 INSIG2Q9Y5U4 225 aa14□□□□□ -0.17
DDX28-201ENST00000332395 TRBV20OR9-2A0A075B6H5 130 aa14□□□□□ -0.17
DDX28-201ENST00000332395 IGHV1-3A0A0C4DH29 117 aa14□□□□□ -0.17
DDX28-201ENST00000332395 ZNF705GA8MUZ8 300 aaPredicted RBP14□□□□□ -0.17
DDX28-201ENST00000332395 OR5G3P0C626 314 aa14□□□□□ -0.17
DDX28-201ENST00000332395 COX7A1P24310 79 aa14□□□□□ -0.17
DDX28-201ENST00000332395 TEX45Q8NA69 505 aa14□□□□□ -0.17
DDX28-201ENST00000332395 ZNF114Q8NC26 417 aa14□□□□□ -0.17
DDX28-201ENST00000332395 C19orf24Q9BVV8 132 aa14□□□□□ -0.17
DDX28-201ENST00000332395 FNDC4Q9H6D8 234 aaPredicted RBP14□□□□□ -0.17
DDX28-201ENST00000332395 CBLN4Q9NTU7 201 aa14□□□□□ -0.17
DDX28-201ENST00000332395 TECRQ9NZ01 308 aaKnown RBP14□□□□□ -0.17
DDX28-201ENST00000332395 PGPEP1LA6NFU8 196 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 EREGO14944 169 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 PSG5Q15238 335 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 NAV3Q8IVL0 2385 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 DCHS2Q6V1P9 2916 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 PPP5D1E7EU14 171 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 CNTFRP26992 372 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 MMD2Q8IY49 270 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 TMEM167BQ9NRX6 74 aa13.99□□□□□ -0.17
DDX28-201ENST00000332395 REG1AP05451 166 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 C1QTNF9P0C862 333 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 CD99P14209 185 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 FAM3BP58499 235 aaPredicted RBP13.98□□□□□ -0.17
DDX28-201ENST00000332395 SSBP2P81877 361 aaPredicted RBP13.98□□□□□ -0.17
DDX28-201ENST00000332395 PRSS8Q16651 343 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 TMEM37Q8WXS4 190 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 ZNF503Q96F45 646 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 ONECUT1Q9UBC0 465 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 ARL2-SNX15V9GYD0 113 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 IGLC7A0M8Q6 106 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 CRYGBP07316 175 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 TAS2R45P59539 299 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 C11orf71Q6IPW1 123 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 PQLC2Q6ZP29 291 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 C11orf52Q96A22 123 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 TIMD4Q96H15 378 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 UHRF2Q96PU4 802 aa13.98□□□□□ -0.17
DDX28-201ENST00000332395 AMMECR1Q9Y4X0 333 aaPredicted RBP13.98□□□□□ -0.17
DDX28-201ENST00000332395 A0A1W2PPQ1 181 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 C22orf46C9J442 243 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 OR7C2O60412 319 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 LIPFP07098 398 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 AREGP15514 252 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 SRP14P37108 136 aaKnown RBP13.97□□□□□ -0.17
DDX28-201ENST00000332395 LY6DQ14210 128 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 TNXAQ16473 311 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 CLEC12BQ2HXU8 276 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 ACTL10Q5JWF8 245 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 LY6G5BQ8NDX9 201 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 NPIPB3Q92617 1050 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 RPEQ96AT9 228 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 TMEM18Q96B42 140 aa13.97□□□□□ -0.17
DDX28-201ENST00000332395 PSMB11A5LHX3 300 aa13.96□□□□□ -0.17
DDX28-201ENST00000332395 IGHV3-48P01763 117 aa13.96□□□□□ -0.17
DDX28-201ENST00000332395 TMEM68Q96MH6 324 aa13.96□□□□□ -0.17
DDX28-201ENST00000332395 SLC25A33Q9BSK2 321 aa13.96□□□□□ -0.17
DDX28-201ENST00000332395 SIGLEC9Q9Y336 463 aa13.96□□□□□ -0.17
DDX28-201ENST00000332395 PLXNB1O43157 2135 aa13.96□□□□□ -0.17
DDX28-201ENST00000332395 HRNRQ86YZ3 2850 aaPredicted RBP13.96□□□□□ -0.18
DDX28-201ENST00000332395 GGCTO75223 188 aaKnown RBP13.96□□□□□ -0.18
DDX28-201ENST00000332395 RPL27AP46776 148 aaKnown RBP13.96□□□□□ -0.18
DDX28-201ENST00000332395 MRPL41Q8IXM3 137 aaKnown RBP13.96□□□□□ -0.18
DDX28-201ENST00000332395 OR2T10Q8NGZ9 312 aa13.96□□□□□ -0.18
DDX28-201ENST00000332395 MRPL32Q9BYC8 188 aaKnown RBP13.96□□□□□ -0.18
DDX28-201ENST00000332395 C8orf88P0DMB2 117 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 HCP5Q6MZN7 132 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 KCNIP4Q6PIL6 250 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 SFRP2Q96HF1 295 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 MRPL36Q9P0J6 103 aaKnown RBP13.95□□□□□ -0.18
DDX28-201ENST00000332395 COL6A6A6NMZ7 2263 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 IGKV1D-37A0A075B6S9 117 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 TCRBV4S1A1TA0A5B7 111 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 LY6LH3BQJ8 138 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 COMPP49747 757 aaPredicted RBP13.95□□□□□ -0.18
DDX28-201ENST00000332395 THAP8Q8NA92 274 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 OCC1Q8TAD7 63 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 NEU4Q8WWR8 484 aaPredicted RBP13.95□□□□□ -0.18
DDX28-201ENST00000332395 RNF2Q99496 336 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 SNHG12Q9BXW3 62 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 DNAJC4Q9NNZ3 241 aa13.95□□□□□ -0.18
DDX28-201ENST00000332395 MDFIC2A0A1B0GVS7 189 aa13.94□□□□□ -0.18
DDX28-201ENST00000332395 TYMSP04818 313 aa13.94□□□□□ -0.18
DDX28-201ENST00000332395 OR10J4P0C629 311 aa13.94□□□□□ -0.18
DDX28-201ENST00000332395 HNF1AP20823 631 aa13.94□□□□□ -0.18
DDX28-201ENST00000332395 ZNF90Q03938 601 aa13.94□□□□□ -0.18
DDX28-201ENST00000332395 IQCJQ1A5X6 159 aa13.94□□□□□ -0.18
DDX28-201ENST00000332395 MORN5Q5VZ52 161 aa13.94□□□□□ -0.18
DDX28-201ENST00000332395 PVRIGQ6DKI7 326 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms