RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PALMDQ9NP74 551 aa14.31□□□□□ -0.12
CIRBP-245ENST00000621399 IGHV3-21A0A0B4J1V1 117 aa14.3□□□□□ -0.12
CIRBP-245ENST00000621399 MPTX1A8MV57 137 aa14.3□□□□□ -0.12
CIRBP-245ENST00000621399 FAM90A26D6RGX4 464 aa14.3□□□□□ -0.12
CIRBP-245ENST00000621399 RNASE2P10153 161 aaKnown RBP14.3□□□□□ -0.12
CIRBP-245ENST00000621399 ZP3P21754 424 aa14.3□□□□□ -0.12
CIRBP-245ENST00000621399 HTR2BP41595 481 aa14.3□□□□□ -0.12
CIRBP-245ENST00000621399 CLEC19AQ6UXS0 136 aa14.3□□□□□ -0.12
CIRBP-245ENST00000621399 DTD1Q8TEA8 209 aa14.3□□□□□ -0.12
CIRBP-245ENST00000621399 K7EIM0 57 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 PRAF2O60831 178 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 PTTG1O95997 202 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 CLEC3BP05452 202 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 IGLL1P15814 213 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 SPNP16150 400 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 HOXD3P31249 432 aaPredicted RBP14.29□□□□□ -0.12
CIRBP-245ENST00000621399 ZNF502Q8TBZ5 544 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 SCARB1Q8WTV0 552 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 DCUN1D4Q92564 292 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 DLX4Q92988 240 aaPredicted RBP14.29□□□□□ -0.12
CIRBP-245ENST00000621399 PINX1Q96BK5 328 aaKnown RBP14.29□□□□□ -0.12
CIRBP-245ENST00000621399 RCC1LQ96I51 464 aaKnown RBP14.29□□□□□ -0.12
CIRBP-245ENST00000621399 CCDC140Q96MF4 163 aa14.29□□□□□ -0.12
CIRBP-245ENST00000621399 PPP5D1E7EU14 171 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 MED6O75586 246 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 MT-CO2P00403 227 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 ARL3P36405 182 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 DCTN2Q13561 401 aaKnown RBP14.28□□□□□ -0.12
CIRBP-245ENST00000621399 RPEL1Q2QD12 228 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 IAH1Q2TAA2 248 aaPredicted RBP14.28□□□□□ -0.12
CIRBP-245ENST00000621399 BSXQ3C1V8 233 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 C11orf87Q6NUJ2 197 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 SLC24A4Q8NFF2 622 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 MCRIP2Q9BUT9 160 aaKnown RBP14.28□□□□□ -0.12
CIRBP-245ENST00000621399 MAGT1Q9H0U3 335 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 C21orf62Q9NYP8 219 aa14.28□□□□□ -0.12
CIRBP-245ENST00000621399 SNRPGP15A8MWD9 76 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 FAM25EA8MYX2 175 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 I3L2K1 104 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 CORTO00230 105 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 BMPR1BO00238 502 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 CCSO14618 274 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 OVOL1O14753 267 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 IFNA10P01566 189 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 GPR183P32249 361 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 PVRIGQ6DKI7 326 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 OR10C1Q96KK4 312 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 GSKIPQ9P0R6 139 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 U3KQ87 197 aa14.27□□□□□ -0.13
CIRBP-245ENST00000621399 SYNGR2O43760 224 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 GGCTO75223 188 aaKnown RBP14.26□□□□□ -0.13
CIRBP-245ENST00000621399 IAPPP10997 89 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 NPY1RP25929 384 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 NKX2-1P43699 371 aaPredicted RBP14.26□□□□□ -0.13
CIRBP-245ENST00000621399 TATDN3Q17R31 274 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 C2orf83Q53S99 150 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 Q56UQ5 140 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 OXLD1Q5BKU9 147 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 NOXA1Q86UR1 476 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 ZBTB8BQ8NAP8 495 aaPredicted RBP14.26□□□□□ -0.13
CIRBP-245ENST00000621399 UBAC2Q8NBM4 344 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 OR4D5Q8NGN0 318 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 ZC4H2Q9NQZ6 224 aa14.26□□□□□ -0.13
CIRBP-245ENST00000621399 C5orf51A6NDU8 294 aa14.25□□□□□ -0.13
CIRBP-245ENST00000621399 G3V4G9 280 aa14.25□□□□□ -0.13
CIRBP-245ENST00000621399 OR2C1O95371 312 aa14.25□□□□□ -0.13
CIRBP-245ENST00000621399 SCGB1D2O95969 90 aa14.25□□□□□ -0.13
CIRBP-245ENST00000621399 IGHV3-48P01763 117 aa14.25□□□□□ -0.13
CIRBP-245ENST00000621399 MFAP4P55083 255 aa14.25□□□□□ -0.13
CIRBP-245ENST00000621399 SYNJ2BPP57105 145 aa14.25□□□□□ -0.13
CIRBP-245ENST00000621399 ID3Q02535 119 aa14.25□□□□□ -0.13
CIRBP-245ENST00000621399 KLF5Q13887 457 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-245ENST00000621399 CIB3Q96Q77 187 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-245ENST00000621399 OR2T8A6NH00 312 aa14.24□□□□□ -0.13
CIRBP-245ENST00000621399 SEC14L6B5MCN3 397 aa14.24□□□□□ -0.13
CIRBP-245ENST00000621399 WRBO00258 174 aa14.24□□□□□ -0.13
CIRBP-245ENST00000621399 OPRK1P41145 380 aa14.24□□□□□ -0.13
CIRBP-245ENST00000621399 ATP5IP56385 69 aaPredicted RBP14.24□□□□□ -0.13
CIRBP-245ENST00000621399 POLR2GP62487 172 aaKnown RBP eCLIP14.24□□□□□ -0.13
CIRBP-245ENST00000621399 GSG1LQ6UXU4 331 aa14.24□□□□□ -0.13
CIRBP-245ENST00000621399 RNASEH2CQ8TDP1 164 aaKnown RBP14.24□□□□□ -0.13
CIRBP-245ENST00000621399 TMEM170AQ8WVE7 144 aa14.24□□□□□ -0.13
CIRBP-245ENST00000621399 ATP6V0BQ99437 205 aa14.24□□□□□ -0.13
CIRBP-245ENST00000621399 GPR61Q9BZJ8 451 aa14.24□□□□□ -0.13
CIRBP-245ENST00000621399 GAR1Q9NY12 217 aaKnown RBP14.24□□□□□ -0.13
CIRBP-245ENST00000621399 TGOLN2O43493 480 aa14.23□□□□□ -0.13
CIRBP-245ENST00000621399 RGS21Q2M5E4 152 aa14.23□□□□□ -0.13
CIRBP-245ENST00000621399 SAMD5Q5TGI4 173 aa14.23□□□□□ -0.13
CIRBP-245ENST00000621399 ACSM6Q6P461 480 aa14.23□□□□□ -0.13
CIRBP-245ENST00000621399 C1QL4Q86Z23 238 aa14.23□□□□□ -0.13
CIRBP-245ENST00000621399 BSCL2Q96G97 398 aaPredicted RBP14.23□□□□□ -0.13
CIRBP-245ENST00000621399 TXN2Q99757 166 aa14.23□□□□□ -0.13
CIRBP-245ENST00000621399 RPS10-NUDT3A0A1W2PQS6 291 aa14.22□□□□□ -0.13
CIRBP-245ENST00000621399 F8W735 103 aaPredicted RBP14.22□□□□□ -0.13
CIRBP-245ENST00000621399 SSNA1O43805 119 aa14.22□□□□□ -0.13
CIRBP-245ENST00000621399 SSSCA1O60232 199 aa14.22□□□□□ -0.13
CIRBP-245ENST00000621399 LY86O95711 162 aa14.22□□□□□ -0.13
CIRBP-245ENST00000621399 IFNA4P05014 189 aa14.22□□□□□ -0.13
CIRBP-245ENST00000621399 NPBWR1P48145 328 aa14.22□□□□□ -0.13
CIRBP-245ENST00000621399 RPP30P78346 268 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms