RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TMEM177Q53S58 311 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 LRRC10Q5BKY1 277 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 C14orf144Q96I85 54 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 WFIKKN1Q96NZ8 548 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 GVINP1Q7Z2Y8 2422 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 ROS1P08922 2347 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 OR5G3P0C626 314 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 YPEL3P61236 119 aaPredicted RBP13.98□□□□□ -0.17
NEK3-206ENST00000611833 OR5I1Q13606 314 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 CENPWQ5EE01 88 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 OR4C13Q8NGP0 309 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 OR2T6Q8NHC8 308 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 CACNG8Q8WXS5 425 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 ZNF503Q96F45 646 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 DCHS1Q96JQ0 3298 aa13.98□□□□□ -0.17
NEK3-206ENST00000611833 TRAV9-1A0A075B6T8 112 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 LYPD2Q6UXB3 125 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 PNKDQ8N490 385 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 TMEM106BQ9NUM4 274 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 A0A1W2PN81 502 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 C8orf88P0DMB2 117 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 CBLN1P23435 193 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 RPEL1Q2QD12 228 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 TMEM256Q8N2U0 113 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 VSTM2AQ8TAG5 236 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 PCNX1Q96RV3 2341 aa13.97□□□□□ -0.17
NEK3-206ENST00000611833 A0A1B0GUS0 222 aa13.96□□□□□ -0.17
NEK3-206ENST00000611833 E7EUB6 86 aa13.96□□□□□ -0.17
NEK3-206ENST00000611833 SUMO1P63165 101 aaKnown RBP13.96□□□□□ -0.17
NEK3-206ENST00000611833 DIAPH2-AS1Q14236 149 aa13.96□□□□□ -0.17
NEK3-206ENST00000611833 PDPNQ86YL7 162 aa13.96□□□□□ -0.17
NEK3-206ENST00000611833 TMEM186Q96B77 213 aa13.96□□□□□ -0.17
NEK3-206ENST00000611833 SLC25A33Q9BSK2 321 aa13.96□□□□□ -0.17
NEK3-206ENST00000611833 TIGITQ495A1 244 aa13.96□□□□□ -0.18
NEK3-206ENST00000611833 PRR30Q53SZ7 412 aaPredicted RBP13.96□□□□□ -0.18
NEK3-206ENST00000611833 REC114Q7Z4M0 266 aa13.96□□□□□ -0.18
NEK3-206ENST00000611833 MMD2Q8IY49 270 aa13.96□□□□□ -0.18
NEK3-206ENST00000611833 OR4A5Q8NH83 315 aa13.96□□□□□ -0.18
NEK3-206ENST00000611833 TMEM167AQ8TBQ9 72 aa13.96□□□□□ -0.18
NEK3-206ENST00000611833 ZNF835Q9Y2P0 537 aa13.96□□□□□ -0.18
NEK3-206ENST00000611833 PIEZO2Q9H5I5 2752 aa13.96□□□□□ -0.18
NEK3-206ENST00000611833 LGALS4P56470 323 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 UNQ6494/PRO21346Q6UXR6 183 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 ZNF664Q8N3J9 261 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 OR1L6Q8NGR2 347 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 MRPL32Q9BYC8 188 aaKnown RBP13.95□□□□□ -0.18
NEK3-206ENST00000611833 DYNLRB1Q9NP97 96 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 GRIFINA4D1Z8 144 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 GGTLC3B5MD39 225 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 TNFRSF13BO14836 293 aaPredicted RBP13.95□□□□□ -0.18
NEK3-206ENST00000611833 ASCL5Q7RTU5 278 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 MRPL18Q9H0U6 180 aaKnown RBP13.95□□□□□ -0.18
NEK3-206ENST00000611833 DNAJC4Q9NNZ3 241 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 WASHC3Q9Y3C0 194 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 V9GYV3 84 aa13.95□□□□□ -0.18
NEK3-206ENST00000611833 SUB1P53999 127 aaKnown RBP eCLIP13.94□□□□□ -0.18
NEK3-206ENST00000611833 IQCJQ1A5X6 159 aa13.94□□□□□ -0.18
NEK3-206ENST00000611833 C10orf55Q5SWW7 151 aa13.94□□□□□ -0.18
NEK3-206ENST00000611833 FAM71F2Q6NXP2 309 aa13.94□□□□□ -0.18
NEK3-206ENST00000611833 RNASE6Q93091 150 aaKnown RBP13.94□□□□□ -0.18
NEK3-206ENST00000611833 CTSZQ9UBR2 303 aa13.94□□□□□ -0.18
NEK3-206ENST00000611833 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
NEK3-206ENST00000611833 APC2O95996 2303 aa13.94□□□□□ -0.18
NEK3-206ENST00000611833 TRAV5A0A0B4J249 113 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 A0A1W2PRE2 83 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 INS-IGF2F8WCM5 200 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 FCN1O00602 326 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 NUPR1O60356 82 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 IER3P46695 156 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 WT1-ASQ06250 92 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 SSX8Q7RTT4 187 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 TGIF2LXQ8IUE1 241 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 OR8I2Q8N0Y5 310 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 LINC00311Q8N616 119 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 RNF2Q99496 336 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 ZNF430Q9H8G1 570 aaPredicted RBP13.93□□□□□ -0.18
NEK3-206ENST00000611833 COX7A2P2O60397 106 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 SCGB1D1O95968 90 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 UBE2L3P68036 154 aaKnown RBP13.93□□□□□ -0.18
NEK3-206ENST00000611833 CMTM2Q8TAZ6 248 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 NOL4LQ96MY1 436 aaPredicted RBP13.93□□□□□ -0.18
NEK3-206ENST00000611833 RNASE7Q9H1E1 156 aaKnown RBP13.93□□□□□ -0.18
NEK3-206ENST00000611833 MUC6Q6W4X9 2439 aa13.93□□□□□ -0.18
NEK3-206ENST00000611833 SSBP2P81877 361 aaPredicted RBP13.92□□□□□ -0.18
NEK3-206ENST00000611833 SPACA3Q8IXA5 215 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 C8orf31Q8N9H6 132 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 NPIPB3Q92617 1050 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 SLC25A2Q9BXI2 301 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 PKDREJQ9NTG1 2253 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 SPTBN2O15020 2390 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 SHISA9B4DS77 424 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 SLC25A17O43808 307 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 IGHV3-48P01763 117 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 MGST1P10620 155 aaKnown RBP13.92□□□□□ -0.18
NEK3-206ENST00000611833 CRISP2P16562 243 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 LOXP28300 417 aaPredicted RBP13.92□□□□□ -0.18
NEK3-206ENST00000611833 SELENOTP62341 195 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 VMA21Q3ZAQ7 101 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 MORN5Q5VZ52 161 aa13.92□□□□□ -0.18
NEK3-206ENST00000611833 DMRTC2Q8IXT2 367 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms