RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 A6NNC1 897 aa13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 SAA1P0DJI8 122 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 ZNF25P17030 456 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 C2orf83Q53S99 150 aa13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 MRPL54Q6P161 138 aaKnown RBP13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 SLC25A48Q6ZT89 311 aaKnown RBP13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 SIGLECL1Q8N7X8 197 aa13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 NHLRC2Q8NBF2 726 aa13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 RNF7Q9UBF6 113 aa13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 TBL2Q9Y4P3 447 aaKnown RBP13.48□□□□□ -0.25
PCDHGA11-202ENST00000518882 RP1L1Q8IWN7 2480 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 ISLRO14498 428 aa13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 CA1P00915 261 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 MGST1P10620 155 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 GATA4P43694 442 aa13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 KRTDAPP60985 99 aa13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 LINC00479Q96M42 142 aa13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 SLC25A33Q9BSK2 321 aa13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 MBD3L4A6NDZ8 208 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 MBD3L3A6NE82 208 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 MBD3L5A6NJ08 208 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 BRS3P32247 399 aa13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 PPOXP50336 477 aa13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 MBD3L2Q8NHZ7 208 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 RAB9BQ9NP90 201 aa13.47□□□□□ -0.25
PCDHGA11-202ENST00000518882 DCHS1Q96JQ0 3298 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 PSMB11A5LHX3 300 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 M0R296 226 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 BMPR1BO00238 502 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 IGHV1-46P01743 117 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 MT-ND6P03923 174 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 SSBP2P81877 361 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 RTL8BQ17RB0 113 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 TIMM23BQ5SRD1 257 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 WDR73Q6P4I2 378 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 OR2T6Q8NHC8 308 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 FAM168AQ92567 244 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 FAM167A-AS1Q96KT0 104 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 SLC25A2Q9BXI2 301 aa13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 RPUSD1Q9UJJ7 312 aaKnown RBP13.46□□□□□ -0.25
PCDHGA11-202ENST00000518882 SMIM27A0A1W2PRY6 76 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 A0A1W2PS18 150 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 E7EUB6 86 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 C8orf88P0DMB2 117 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 SRIP30626 198 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 TAS2R45P59539 299 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 CD69Q07108 199 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 OR10J3Q5JRS4 329 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 ZNF788Q6ZQV5 615 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 C22orf34Q6ZV56 151 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 PNKDQ8N490 385 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 OR1L8Q8NGR8 309 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 LINC00574Q9H8X3 128 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 NRN1Q9NPD7 142 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 SERTAD4Q9NUC0 356 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 DMXL1Q9Y485 3027 aa13.46□□□□□ -0.26
PCDHGA11-202ENST00000518882 A0A1W2PRE2 83 aa13.45□□□□□ -0.26
PCDHGA11-202ENST00000518882 M0QZK8 103 aa13.45□□□□□ -0.26
PCDHGA11-202ENST00000518882 RPLP1P05386 114 aaKnown RBP13.45□□□□□ -0.26
PCDHGA11-202ENST00000518882 AMTP48728 403 aa13.45□□□□□ -0.26
PCDHGA11-202ENST00000518882 TNFAIP6P98066 277 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA11-202ENST00000518882 KCNS1Q96KK3 526 aa13.45□□□□□ -0.26
PCDHGA11-202ENST00000518882 BET1LQ9NYM9 111 aa13.45□□□□□ -0.26
PCDHGA11-202ENST00000518882 CDC42EP3Q9UKI2 254 aa13.45□□□□□ -0.26
PCDHGA11-202ENST00000518882 DIRC3C9JPN6 131 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 AMY1AP04745 511 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 PMCHP20382 165 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 ZNF586Q9NXT0 402 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 PLXNB1O43157 2135 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 ZNF253O75346 499 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 CYB5R2Q6BCY4 276 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 TMEM208Q9BTX3 173 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 C19orf24Q9BVV8 132 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 SSBP3Q9BWW4 388 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 MRPL20Q9BYC9 149 aaKnown RBP13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 MGAQ8IWI9 3026 aa13.44□□□□□ -0.26
PCDHGA11-202ENST00000518882 PYYP10082 97 aa13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 CHRNB4P30926 498 aa13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 UBE2L3P68036 154 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 MRPL52Q86TS9 123 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 ASCL3Q9NQ33 180 aa13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 NDUFA4L2Q9NRX3 87 aa13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 FAM215AQ9Y5M1 114 aa13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 CTRLP40313 264 aa13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 SLAQ13239 276 aa13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 DEFB109BQ30KR1 87 aa13.43□□□□□ -0.26
PCDHGA11-202ENST00000518882 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 IGHV3-48P01763 117 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 RPL19P84098 196 aaKnown RBP13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 BATFQ16520 125 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 ZNF833PQ6ZTB9 187 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 NIT1Q86X76 327 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 FAM19A2Q8N3H0 131 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 HARBI1Q96MB7 349 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 RNF2Q99496 336 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 ROS1P08922 2347 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 TM4SF5O14894 197 aa13.42□□□□□ -0.26
PCDHGA11-202ENST00000518882 HLA-DQA1P01909 254 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms