RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 K7EIM0 57 aa14.91□□□□□ -0.02
HDAC4-212ENST00000495497 IGHV3-48P01763 117 aa14.91□□□□□ -0.02
HDAC4-212ENST00000495497 SPNP16150 400 aa14.91□□□□□ -0.02
HDAC4-212ENST00000495497 ZNF502Q8TBZ5 544 aa14.91□□□□□ -0.02
HDAC4-212ENST00000495497 ZNF431Q8TF32 576 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-212ENST00000495497 SCARB1Q8WTV0 552 aa14.91□□□□□ -0.02
HDAC4-212ENST00000495497 PINX1Q96BK5 328 aaKnown RBP14.91□□□□□ -0.02
HDAC4-212ENST00000495497 CXorf58Q96LI9 332 aa14.91□□□□□ -0.02
HDAC4-212ENST00000495497 TRBV7-1A0A0A6YYK4 115 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 I3L2K1 104 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 OVOL1O14753 267 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 CLEC3BP05452 202 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 SLC25A6P12236 298 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 ARL3P36405 182 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 RPEL1Q2QD12 228 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 UXS1Q8NBZ7 420 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 VN1R17PQ8TDU5 208 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 NBEAL1Q6ZS30 2694 aa14.9□□□□□ -0.02
HDAC4-212ENST00000495497 CCSO14618 274 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 OR2C1O95371 312 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 MT-CO2P00403 227 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 IFNA21P01568 189 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 ZP3P21754 424 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 GPR183P32249 361 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 SYNJ2BPP57105 145 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 KLF5Q13887 457 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-212ENST00000495497 BSXQ3C1V8 233 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 DTD1Q8TEA8 209 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 OR10C1Q96KK4 312 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 MAGT1Q9H0U3 335 aa14.89□□□□□ -0.03
HDAC4-212ENST00000495497 SEC14L6B5MCN3 397 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 INMT-MINDY4F8WBC2 141 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 IL5P05113 134 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 IAPPP10997 89 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 SUB1P53999 127 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC4-212ENST00000495497 MLANAQ16655 118 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 BEAN1Q3B7T3 259 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 PVRIGQ6DKI7 326 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 PLET1Q6UQ28 207 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 C12orf45Q8N5I9 185 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-212ENST00000495497 UBAC2Q8NBM4 344 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 TMEM170AQ8WVE7 144 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 MCRIP2Q9BUT9 160 aaKnown RBP14.88□□□□□ -0.03
HDAC4-212ENST00000495497 HIPK2Q9H2X6 1198 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 C21orf62Q9NYP8 219 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 FBN3Q75N90 2809 aa14.88□□□□□ -0.03
HDAC4-212ENST00000495497 OR2T8A6NH00 312 aa14.87□□□□□ -0.03
HDAC4-212ENST00000495497 F8W735 103 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-212ENST00000495497 GGCTO75223 188 aaKnown RBP14.87□□□□□ -0.03
HDAC4-212ENST00000495497 HTR2BP41595 481 aa14.87□□□□□ -0.03
HDAC4-212ENST00000495497 SLC24A4Q8NFF2 622 aa14.87□□□□□ -0.03
HDAC4-212ENST00000495497 CACFD1Q9UGQ2 172 aa14.87□□□□□ -0.03
HDAC4-212ENST00000495497 IGHV3-35A0A0C4DH35 117 aa14.86□□□□□ -0.03
HDAC4-212ENST00000495497 C2orf83Q53S99 150 aa14.86□□□□□ -0.03
HDAC4-212ENST00000495497 Q56UQ5 140 aa14.86□□□□□ -0.03
HDAC4-212ENST00000495497 FAM209BQ5JX69 171 aa14.86□□□□□ -0.03
HDAC4-212ENST00000495497 OR4D5Q8NGN0 318 aa14.86□□□□□ -0.03
HDAC4-212ENST00000495497 MARVELD1Q9BSK0 173 aa14.86□□□□□ -0.03
HDAC4-212ENST00000495497 NOTCH3Q9UM47 2321 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 FAM25EA8MYX2 175 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 FAM90A26D6RGX4 464 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 SAP30O75446 220 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 IFNA10P01566 189 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 PRB2P02812 416 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-212ENST00000495497 IAH1Q2TAA2 248 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-212ENST00000495497 C9orf66Q5T8R8 295 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 ACSM6Q6P461 480 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 CHRDL1Q9BU40 450 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 FNDC4Q9H6D8 234 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-212ENST00000495497 GSKIPQ9P0R6 139 aa14.85□□□□□ -0.03
HDAC4-212ENST00000495497 WRBO00258 174 aa14.84□□□□□ -0.03
HDAC4-212ENST00000495497 TGOLN2O43493 480 aa14.84□□□□□ -0.03
HDAC4-212ENST00000495497 SYNGR2O43760 224 aa14.84□□□□□ -0.03
HDAC4-212ENST00000495497 NPY1RP25929 384 aa14.84□□□□□ -0.03
HDAC4-212ENST00000495497 MFAP4P55083 255 aa14.84□□□□□ -0.03
HDAC4-212ENST00000495497 KRTAP10-11P60412 298 aa14.84□□□□□ -0.03
HDAC4-212ENST00000495497 ZBTB8BQ8NAP8 495 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-212ENST00000495497 OR9G4Q8NGQ1 327 aa14.84□□□□□ -0.03
HDAC4-212ENST00000495497 MRPL36Q9P0J6 103 aaKnown RBP14.84□□□□□ -0.03
HDAC4-212ENST00000495497 MED6O75586 246 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 SCGB1D2O95969 90 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 EDN2P20800 178 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 ADMP35318 185 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 OPRK1P41145 380 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 NKX2-1P43699 371 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-212ENST00000495497 POLR2GP62487 172 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC4-212ENST00000495497 ID3Q02535 119 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 TATDN3Q17R31 274 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 KPRPQ5T749 579 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-212ENST00000495497 IL34Q6ZMJ4 242 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 HAPLN4Q86UW8 402 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 BSCL2Q96G97 398 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-212ENST00000495497 GPN1Q9HCN4 374 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-212ENST00000495497 U3KQ87 197 aa14.83□□□□□ -0.04
HDAC4-212ENST00000495497 C5orf51A6NDU8 294 aa14.82□□□□□ -0.04
HDAC4-212ENST00000495497 CORTO00230 105 aa14.82□□□□□ -0.04
HDAC4-212ENST00000495497 CTSGP08311 255 aa14.82□□□□□ -0.04
HDAC4-212ENST00000495497 DEFA6Q01524 100 aa14.82□□□□□ -0.04
HDAC4-212ENST00000495497 GPHB5Q86YW7 130 aa14.82□□□□□ -0.04
HDAC4-212ENST00000495497 ZNF320A2RRD8 509 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms