RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 FAM90A10PA6NDY2 464 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 FAM90A8PA6NJQ4 464 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 FAM90A13PP0C7W8 464 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 FAM90A24PP0C7X0 464 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 AZU1P20160 251 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 OTORQ9NRC9 128 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 IL20Q9NYY1 176 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 IGHV3-16A0A0C4DH30 117 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 RCHY1Q96PM5 261 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 MRPS18BQ9Y676 258 aaKnown RBP9.28□□□□□ -0.92
EWSR1-216ENST00000479135 ZNF561-AS1K7EIQ3 104 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 OSR1Q8TAX0 266 aaPredicted RBP9.28□□□□□ -0.92
EWSR1-216ENST00000479135 NPDC1Q9NQX5 325 aaPredicted RBP9.28□□□□□ -0.92
EWSR1-216ENST00000479135 SIGLEC7Q9Y286 467 aa9.28□□□□□ -0.92
EWSR1-216ENST00000479135 IZUMO1RA6ND01 250 aa9.27□□□□□ -0.92
EWSR1-216ENST00000479135 PGLYRP1O75594 196 aaPredicted RBP9.27□□□□□ -0.92
EWSR1-216ENST00000479135 PLA2G1BP04054 148 aaKnown RBP9.27□□□□□ -0.92
EWSR1-216ENST00000479135 BRWD1Q9NSI6 2320 aa9.27□□□□□ -0.92
EWSR1-216ENST00000479135 KLRD1Q13241 179 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 LAGE3Q14657 143 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 ZAR1Q86SH2 424 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 C4AP0C0L4 1744 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 C4BP0C0L5 1744 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 FOXL2P58012 376 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 TEX43Q6ZNM6 134 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 ZNF138P52744 262 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 PCOLCEQ15113 449 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 PPDPFLQ8WWR9 84 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 IFI27L2Q9H2X8 130 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 V9GYY9 64 aa9.27□□□□□ -0.93
EWSR1-216ENST00000479135 IGKV2-40A0A087WW87 121 aaPredicted RBP9.27□□□□□ -0.93
EWSR1-216ENST00000479135 IGKV2D-40P01614 121 aaPredicted RBP9.27□□□□□ -0.93
EWSR1-216ENST00000479135 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 KLF5Q13887 457 aaPredicted RBP9.26□□□□□ -0.93
EWSR1-216ENST00000479135 DEFB123Q8N688 67 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 A0A087WWL8 130 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 CELA3AP09093 270 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 XAF1Q6GPH4 301 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 CXCL16Q9H2A7 254 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 IGHV4-30-2A0A087WSY4 118 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 UBE2BP63146 152 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 WIPF2Q8TF74 440 aaPredicted RBP9.26□□□□□ -0.93
EWSR1-216ENST00000479135 DLEU1O43261 78 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 RNASE2P10153 161 aaKnown RBP9.26□□□□□ -0.93
EWSR1-216ENST00000479135 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
EWSR1-216ENST00000479135 PSMG4Q5JS54 123 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 ZNF660Q6AZW8 331 aaPredicted RBP9.26□□□□□ -0.93
EWSR1-216ENST00000479135 BHLHA9Q7RTU4 235 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 FMC1Q96HJ9 113 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 ST6GALNAC2Q9UJ37 374 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 RASL10AQ92737 203 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 V9GYH0 126 aa9.26□□□□□ -0.93
EWSR1-216ENST00000479135 AFDNP55196 1824 aaKnown RBP9.26□□□□□ -0.93
EWSR1-216ENST00000479135 PKD1L3Q7Z443 1732 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 LAMB4A4D0S4 1761 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 TCRBV4S1A1TA0A5B7 111 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 SAP30O75446 220 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 IGKV4-1P06312 121 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 CBLN3Q6UW01 205 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 ZNF318Q5VUA4 2279 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 C16orf97H3BN30 126 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 SFXN3Q9BWM7 321 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 GPBAR1Q8TDU6 330 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 A0A1W2PR77 199 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 LIMS2Q7Z4I7 341 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 DLL3Q9NYJ7 618 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 SCN11AQ9UI33 1791 aa9.25□□□□□ -0.93
EWSR1-216ENST00000479135 APOBEC4Q8WW27 367 aaKnown RBP9.24□□□□□ -0.93
EWSR1-216ENST00000479135 ICE1Q9Y2F5 2266 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 CA7P43166 264 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 CASC2Q6XLA1 102 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 PROP1O75360 226 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 LINC00299Q6ZSB3 139 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 FXYD1O00168 92 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 VDAC2P45880 294 aaPredicted RBP9.24□□□□□ -0.93
EWSR1-216ENST00000479135 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 NRTNQ99748 197 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 K7EMI3 77 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 VSIG8P0DPA2 414 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 FAM104BQ5XKR9 115 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 IGFL4Q6B9Z1 124 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 BMPERQ8N8U9 685 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 GNB1LQ9BYB4 327 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 NWD2Q9ULI1 1742 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 A0A0B4J2E0 115 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 IGHV4-61A0A0C4DH41 118 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 A0A1B0GX12 115 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 FAM231BA6NCW3 169 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 KNCNA6PVL3 124 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 TIMM21Q9BVV7 248 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 RETNQ9HD89 108 aa9.24□□□□□ -0.93
EWSR1-216ENST00000479135 PI4KAP42356 2102 aa9.23□□□□□ -0.93
EWSR1-216ENST00000479135 ERVH48-1M5A8F1 160 aa9.23□□□□□ -0.93
EWSR1-216ENST00000479135 SS18Q15532 418 aa9.23□□□□□ -0.93
EWSR1-216ENST00000479135 PAX1P15863 534 aa9.23□□□□□ -0.93
EWSR1-216ENST00000479135 C2orf68Q2NKX9 166 aa9.23□□□□□ -0.93
EWSR1-216ENST00000479135 C12orf73Q69YU5 71 aa9.23□□□□□ -0.93
EWSR1-216ENST00000479135 STPG4Q8N801 248 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms