RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 IGHV1-69-2A0A0G2JMI3 117 aa11.09□□□□□ -0.63
PTPN6-202ENST00000399448 IGLV2-23P01705 113 aa11.09□□□□□ -0.63
PTPN6-202ENST00000399448 HNF1AP20823 631 aa11.09□□□□□ -0.63
PTPN6-202ENST00000399448 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPN6-202ENST00000399448 TGIF2LXQ8IUE1 241 aa11.09□□□□□ -0.63
PTPN6-202ENST00000399448 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
PTPN6-202ENST00000399448 ZNF503Q96F45 646 aa11.09□□□□□ -0.63
PTPN6-202ENST00000399448 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
PTPN6-202ENST00000399448 TNCP24821 2201 aa11.08□□□□□ -0.64
PTPN6-202ENST00000399448 CGB1A6NKQ9 187 aa11.08□□□□□ -0.64
PTPN6-202ENST00000399448 B9A039 149 aa11.08□□□□□ -0.64
PTPN6-202ENST00000399448 AMBPP02760 352 aa11.08□□□□□ -0.64
PTPN6-202ENST00000399448 C8orf88P0DMB2 117 aa11.08□□□□□ -0.64
PTPN6-202ENST00000399448 IGHV1-8P0DP01 117 aa11.08□□□□□ -0.64
PTPN6-202ENST00000399448 OR2T6Q8NHC8 308 aa11.08□□□□□ -0.64
PTPN6-202ENST00000399448 EAF1Q96JC9 268 aaPredicted RBP11.08□□□□□ -0.64
PTPN6-202ENST00000399448 RNF2Q99496 336 aa11.08□□□□□ -0.64
PTPN6-202ENST00000399448 MRPL32Q9BYC8 188 aaKnown RBP11.08□□□□□ -0.64
PTPN6-202ENST00000399448 ZNF430Q9H8G1 570 aaPredicted RBP11.08□□□□□ -0.64
PTPN6-202ENST00000399448 TRAV9-1A0A075B6T8 112 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 HELTA6NFD8 242 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 K7EN84 100 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 OR7C2O60412 319 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 CD3EP07766 207 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
PTPN6-202ENST00000399448 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 VMA21Q3ZAQ7 101 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 SLC25A33Q9BSK2 321 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 TRBV23-1A0A0A0MS06 115 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 LGALS7P47929 136 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 C11orf42Q8N5U0 333 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 SCNM1Q9BWG6 230 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 TMEM133Q9H2Q1 129 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 DNAJC4Q9NNZ3 241 aa11.07□□□□□ -0.64
PTPN6-202ENST00000399448 TRAV20A0A0B4J274 112 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 CRYBB3P26998 211 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 PRDM13Q9H4Q3 707 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 NBEAQ8NFP9 2946 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 CEP250Q9BV73 2442 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 BOD1L1Q8NFC6 3051 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.06□□□□□ -0.64
PTPN6-202ENST00000399448 A0A1W2PRE2 83 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 PSMB11A5LHX3 300 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 YPEL3P61236 119 aaPredicted RBP11.06□□□□□ -0.64
PTPN6-202ENST00000399448 ZNF90Q03938 601 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 JOSD1Q15040 202 aaPredicted RBP11.06□□□□□ -0.64
PTPN6-202ENST00000399448 C10orf55Q5SWW7 151 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 OR5R1Q8NH85 324 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 TNFRSF14Q92956 283 aa11.06□□□□□ -0.64
PTPN6-202ENST00000399448 MGAQ8IWI9 3026 aa11.05□□□□□ -0.64
PTPN6-202ENST00000399448 SLC25A17O43808 307 aa11.05□□□□□ -0.64
PTPN6-202ENST00000399448 GNG4P50150 75 aa11.05□□□□□ -0.64
PTPN6-202ENST00000399448 PPOXP50336 477 aa11.05□□□□□ -0.64
PTPN6-202ENST00000399448 PRSS8Q16651 343 aa11.05□□□□□ -0.64
PTPN6-202ENST00000399448 FAM167A-AS1Q96KT0 104 aa11.05□□□□□ -0.64
PTPN6-202ENST00000399448 FNDC4Q9H6D8 234 aaPredicted RBP11.05□□□□□ -0.64
PTPN6-202ENST00000399448 RALYQ9UKM9 306 aaKnown RBP11.05□□□□□ -0.64
PTPN6-202ENST00000399448 ACACAQ13085 2346 aa11.05□□□□□ -0.64
PTPN6-202ENST00000399448 ENSAO43768 121 aaKnown RBP11.04□□□□□ -0.64
PTPN6-202ENST00000399448 FAM87AP0C7U9 286 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 SSX2Q16385 188 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 CENPWQ5EE01 88 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 TEX45Q8NA69 505 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 THAP8Q8NA92 274 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 NPIPB3Q92617 1050 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 RITA1Q96K30 269 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 TCRBV4S1A1TA0A5B7 111 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 GGTLC3B5MD39 225 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 SLC17A3O00476 420 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 OR10J4P0C629 311 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 RD3LP0DJH9 198 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 PRRX1P54821 245 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 ERVFC1-1P60608 527 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 SELENOTP62341 195 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 SUMO1P63165 101 aaKnown RBP11.04□□□□□ -0.64
PTPN6-202ENST00000399448 MRGPRG-AS1Q2M3A8 158 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 MRPL41Q8IXM3 137 aaKnown RBP11.04□□□□□ -0.64
PTPN6-202ENST00000399448 TMEM18Q96B42 140 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 GVINP1Q7Z2Y8 2422 aa11.04□□□□□ -0.64
PTPN6-202ENST00000399448 A0A1W2PPI3 338 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 PLAUP00749 431 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 CASP6P55212 293 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 SSBP2P81877 361 aaPredicted RBP11.03□□□□□ -0.64
PTPN6-202ENST00000399448 TIGITQ495A1 244 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 TPSG1Q9NRR2 321 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 IGKV1D-37A0A075B6S9 117 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 TRAV5A0A0B4J249 113 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 COX7A2P2O60397 106 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 FSTL3O95633 263 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 GCGP01275 180 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 LGALS4P56470 323 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 OR5I1Q13606 314 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 RPEL1Q2QD12 228 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 C10orf113Q5VZT2 155 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 MMD2Q8IY49 270 aa11.03□□□□□ -0.64
PTPN6-202ENST00000399448 LINC01560Q8TB33 94 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms