RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 SPI1P17947 270 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 SPCS3P61009 180 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 SNRPD2P62316 118 aaKnown RBP0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 HBA1P69905 142 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR2F1Q13607 317 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 KHDC3LQ587J8 217 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 HIST2H3PS2Q5TEC6 136 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 LPCAT4Q643R3 524 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 MIR17HGQ75NE6 70 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 PHF13Q86YI8 300 aaPredicted RBP0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 TMEM86BQ8N661 226 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 SIGLECL1Q8N7X8 197 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR2T4Q8NH00 348 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 TERB2Q8NHR7 220 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 KLK6Q92876 244 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 IMP4Q96G21 291 aaKnown RBP0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR52E6Q96RD3 313 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 COMMD5Q9GZQ3 224 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 MIXL1Q9H2W2 232 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 CMTM6Q9NX76 183 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 FBXL12Q9NXK8 326 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 HECW2Q9P2P5 1572 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 TP73-AS1Q9UF72 201 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 LAMB4A4D0S4 1761 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 HECW1Q76N89 1606 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 NEO1Q92859 1461 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 MICAL3Q7RTP6 2002 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 PEAK1Q9H792 1746 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 WRNQ14191 1432 aaPredicted RBP eCLIP0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 A0A0D9SG52 128 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 EXOC1LA0A1B0GW35 172 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 C2orf70A6NJV1 201 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 GOLGA6L19H0YKK7 550 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 C19orf84I3L1E1 186 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 M0R036 132 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR1I1O60431 355 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 TCL1BO95988 128 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 IFNA5P01569 189 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 CTSDP07339 412 aaPredicted RBP0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 CRYGAP11844 174 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 HIST1H1TP22492 207 aaPredicted RBP0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 SULT1A1P50225 295 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 NKX2-5P52952 324 aaPredicted RBP0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 PSME3P61289 254 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 PDE6HQ13956 83 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 CCDC122Q5T0U0 273 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 SPOPLQ6IQ16 392 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 DPPA3Q6W0C5 159 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 Q6ZQT0 140 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 BPIFA4PQ86YQ2 179 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 CLVS1Q8IUQ0 354 aaPredicted RBP0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 C20orf196Q8IYI0 205 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 HIST3H2BBQ8N257 126 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 FAM19A2Q8N3H0 131 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 LINC00311Q8N616 119 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR4E2Q8NGC2 313 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 DDI1Q8WTU0 396 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 DNAJC9Q8WXX5 260 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 TOMM6Q96B49 74 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 OBSCN-AS1Q96MR7 158 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 NIPSNAP1Q9BPW8 284 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 ULBP3Q9BZM4 244 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 C11orf68Q9H3H3 251 aaKnown RBP0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 SLC39A9Q9NUM3 307 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 KLK9Q9UKQ9 250 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 ERGIC3Q9Y282 383 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 TMEM56-RWDD3S4R434 201 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 CACNA1BQ00975 2339 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 FREM1Q5H8C1 2179 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 HEATR5AQ86XA9 2040 aa0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 MUC5BQ9HC84 5762 aaPredicted RBP0.33□□□□□ -2.36
RNU6-440P-201ENST00000390882 MTUS2Q5JR59 1369 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 ADGRB2O60241 1585 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 CUL9Q8IWT3 2517 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 INTS1Q8N201 2190 aaKnown RBP0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 BAZ2BQ9UIF8 2168 aaKnown RBP0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 TRAV9-1A0A075B6T8 112 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 LOC110117498A0A087WWA1 95 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 TRAV1-1A0A0B4J248 108 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 PQLC2LA1A4F0 135 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 SMIM23A6NLE4 172 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR2T1O43869 369 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR2B3O76000 313 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 BAALC-AS2P0C853 105 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 PRB4P10163 310 aaPredicted RBP0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 MIFP14174 115 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 RPL5P46777 297 aaKnown RBP0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 CDC42P60953 191 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 RAB4BP61018 213 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 RHOGP84095 191 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 RHEBQ15382 184 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 KCNJ8Q15842 424 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 C8orf74Q6P047 294 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 OOSP2Q86WS3 158 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 ANKRD29Q8N6D5 301 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR5A1Q8NGJ0 315 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 ZNF418Q8TF45 676 aaPredicted RBP0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 H1FXQ92522 213 aaKnown RBP0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 LINC00526Q96FQ7 95 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms