RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 HSPB7Q9UBY9 170 aa12.44□□□□□ -0.42
SNRPB-201ENST00000381342 NOTCH1P46531 2555 aa12.44□□□□□ -0.42
SNRPB-201ENST00000381342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.43□□□□□ -0.42
SNRPB-201ENST00000381342 PITX3O75364 302 aa12.43□□□□□ -0.42
SNRPB-201ENST00000381342 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
SNRPB-201ENST00000381342 SLC25A6P12236 298 aa12.43□□□□□ -0.42
SNRPB-201ENST00000381342 SPNP16150 400 aa12.43□□□□□ -0.42
SNRPB-201ENST00000381342 HOXD3P31249 432 aaPredicted RBP12.43□□□□□ -0.42
SNRPB-201ENST00000381342 SNCAP37840 140 aa12.43□□□□□ -0.42
SNRPB-201ENST00000381342 PLET1Q6UQ28 207 aa12.43□□□□□ -0.42
SNRPB-201ENST00000381342 RBKSQ9H477 322 aa12.43□□□□□ -0.42
SNRPB-201ENST00000381342 RANGRFQ9HD47 186 aaPredicted RBP12.43□□□□□ -0.42
SNRPB-201ENST00000381342 HEYLQ9NQ87 328 aaPredicted RBP12.43□□□□□ -0.42
SNRPB-201ENST00000381342 THYN1Q9P016 225 aa12.43□□□□□ -0.42
SNRPB-201ENST00000381342 PPP5D1E7EU14 171 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 K7EIM0 57 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 BMPR1BO00238 502 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 CCSO14618 274 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 IFNA21P01568 189 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 CLEC19AQ6UXS0 136 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 OR1L6Q8NGR2 347 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 DTD1Q8TEA8 209 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 DCUN1D4Q92564 292 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
SNRPB-201ENST00000381342 CXorf58Q96LI9 332 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
SNRPB-201ENST00000381342 NOTCH3Q9UM47 2321 aa12.42□□□□□ -0.42
SNRPB-201ENST00000381342 BSXQ3C1V8 233 aa12.41□□□□□ -0.42
SNRPB-201ENST00000381342 UXS1Q8NBZ7 420 aa12.41□□□□□ -0.42
SNRPB-201ENST00000381342 ZNF502Q8TBZ5 544 aa12.41□□□□□ -0.42
SNRPB-201ENST00000381342 PINX1Q96BK5 328 aaKnown RBP12.41□□□□□ -0.42
SNRPB-201ENST00000381342 CACFD1Q9UGQ2 172 aa12.41□□□□□ -0.42
SNRPB-201ENST00000381342 TRBV7-1A0A0A6YYK4 115 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 INMT-MINDY4F8WBC2 141 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 IL5P05113 134 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 IAPPP10997 89 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 ZP3P21754 424 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 GPR183P32249 361 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 ARL3P36405 182 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 RPEL1Q2QD12 228 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 Q6ZNX1 250 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 C12orf45Q8N5I9 185 aaPredicted RBP12.4□□□□□ -0.42
SNRPB-201ENST00000381342 SLC24A4Q8NFF2 622 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 VN1R17PQ8TDU5 208 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 MARVELD1Q9BSK0 173 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 MAGT1Q9H0U3 335 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 ZC4H2Q9NQZ6 224 aa12.4□□□□□ -0.42
SNRPB-201ENST00000381342 FAM90A26D6RGX4 464 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 I3L2K1 104 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 OVOL1O14753 267 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 MT-CO2P00403 227 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 IGHV3-48P01763 117 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 HTR2BP41595 481 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 SUB1P53999 127 aaKnown RBP eCLIP12.39□□□□□ -0.433e-7■■■■■ 35.5
SNRPB-201ENST00000381342 IAH1Q2TAA2 248 aaPredicted RBP12.39□□□□□ -0.43
SNRPB-201ENST00000381342 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 OR4D5Q8NGN0 318 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 SCARB1Q8WTV0 552 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 OR10C1Q96KK4 312 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 HIPK2Q9H2X6 1198 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 C21orf62Q9NYP8 219 aa12.39□□□□□ -0.43
SNRPB-201ENST00000381342 OR2T8A6NH00 312 aa12.38□□□□□ -0.43
SNRPB-201ENST00000381342 F8W735 103 aaPredicted RBP12.38□□□□□ -0.43
SNRPB-201ENST00000381342 PRAF2O60831 178 aa12.38□□□□□ -0.43
SNRPB-201ENST00000381342 NPY1RP25929 384 aa12.38□□□□□ -0.43
SNRPB-201ENST00000381342 SYNJ2BPP57105 145 aa12.38□□□□□ -0.43
SNRPB-201ENST00000381342 FAM209BQ5JX69 171 aa12.38□□□□□ -0.43
SNRPB-201ENST00000381342 PVRIGQ6DKI7 326 aa12.38□□□□□ -0.43
SNRPB-201ENST00000381342 ZBTB8BQ8NAP8 495 aaPredicted RBP12.38□□□□□ -0.43
SNRPB-201ENST00000381342 UBAC2Q8NBM4 344 aa12.38□□□□□ -0.43
SNRPB-201ENST00000381342 GPN1Q9HCN4 374 aaPredicted RBP12.38□□□□□ -0.43
SNRPB-201ENST00000381342 FAM25EA8MYX2 175 aa12.37□□□□□ -0.43
SNRPB-201ENST00000381342 SEC14L6B5MCN3 397 aa12.37□□□□□ -0.43
SNRPB-201ENST00000381342 SCGB1D2O95969 90 aa12.37□□□□□ -0.43
SNRPB-201ENST00000381342 IFNA10P01566 189 aa12.37□□□□□ -0.43
SNRPB-201ENST00000381342 CLEC3BP05452 202 aa12.37□□□□□ -0.43
SNRPB-201ENST00000381342 KLF5Q13887 457 aaPredicted RBP12.37□□□□□ -0.43
SNRPB-201ENST00000381342 C2orf83Q53S99 150 aa12.37□□□□□ -0.43
SNRPB-201ENST00000381342 Q56UQ5 140 aa12.37□□□□□ -0.43
SNRPB-201ENST00000381342 C9orf66Q5T8R8 295 aa12.37□□□□□ -0.43
SNRPB-201ENST00000381342 CORTO00230 105 aa12.36□□□□□ -0.43
SNRPB-201ENST00000381342 TGOLN2O43493 480 aa12.36□□□□□ -0.43
SNRPB-201ENST00000381342 SYNGR2O43760 224 aa12.36□□□□□ -0.43
SNRPB-201ENST00000381342 GGCTO75223 188 aaKnown RBP12.36□□□□□ -0.43
SNRPB-201ENST00000381342 MED6O75586 246 aa12.36□□□□□ -0.43
SNRPB-201ENST00000381342 OR2C1O95371 312 aa12.36□□□□□ -0.43
SNRPB-201ENST00000381342 OPRK1P41145 380 aa12.36□□□□□ -0.43
SNRPB-201ENST00000381342 POLR2GP62487 172 aaKnown RBP eCLIP12.36□□□□□ -0.43
SNRPB-201ENST00000381342 FNDC4Q9H6D8 234 aaPredicted RBP12.36□□□□□ -0.43
SNRPB-201ENST00000381342 GSKIPQ9P0R6 139 aa12.36□□□□□ -0.43
SNRPB-201ENST00000381342 IGHV3-35A0A0C4DH35 117 aa12.35□□□□□ -0.43
SNRPB-201ENST00000381342 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
SNRPB-201ENST00000381342 SNRPGP15A8MWD9 76 aa12.35□□□□□ -0.43
SNRPB-201ENST00000381342 WRBO00258 174 aa12.35□□□□□ -0.43
SNRPB-201ENST00000381342 SSSCA1O60232 199 aa12.35□□□□□ -0.43
SNRPB-201ENST00000381342 NKX2-1P43699 371 aaPredicted RBP12.35□□□□□ -0.43
SNRPB-201ENST00000381342 MFAP4P55083 255 aa12.35□□□□□ -0.43
SNRPB-201ENST00000381342 ID3Q02535 119 aa12.35□□□□□ -0.43
SNRPB-201ENST00000381342 EGFEM1PQ0D2K5 195 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms