RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 EDA2RQ9HAV5 297 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF286AQ9HBT8 521 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 ABCB9Q9NP78 766 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 CLN6Q9NWW5 311 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 SLC22A13Q9Y226 551 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 AP3M1Q9Y2T2 418 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 KIAA1109Q2LD37 5005 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGLV4-69A0A075B6H9 119 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 TMEM269A0A1B0GVZ9 245 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 BUB1B-PAK6H3BSN5 160 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 L7N2F9 121 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 TNFRSF11BO00300 401 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGHG2P01859 326 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 CGB3P0DN86 165 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 CGB7P0DN87 165 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 CDK2P24941 298 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 CD34P28906 385 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 IFNGR2P38484 337 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 MAGEA2P43356 314 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 RAB11AP62491 216 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 MEF2CQ06413 473 aaPredicted RBP3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 EDDM3AQ14507 147 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 KIR2DS1Q14954 304 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 RAB11BQ15907 218 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 SNCBQ16143 134 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 PLEKHG7Q6ZR37 379 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 MRPL55Q7Z7F7 128 aaKnown RBP3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 APRG1Q8IVJ8 170 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 C5orf56Q8N8D9 126 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 CHST4Q8NCG5 386 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR52L1Q8NGH7 329 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 OPALINQ96PE5 141 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 TTTY10Q9BZA0 68 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 CHST6Q9GZX3 395 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 EFCAB1Q9HAE3 211 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 LINC00312Q9Y6C7 94 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 V9GYS6 101 aa3.51□□□□□ -1.85
RNU4-39P-201ENST00000362455 KMT2AQ03164 3969 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 HECTD4Q9Y4D8 3996 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGKV1-9A0A0C4DH69 117 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGKV1-12A0A0C4DH73 117 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 A0A1B0GVX0 72 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 hADV38S2A0JD32 116 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 ARRDC5A6NEK1 342 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 RIIAD1A6NNX1 92 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 LEUTXA8MZ59 168 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 SEC14L6B5MCN3 397 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 H3BSH0 61 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 SIVA1O15304 175 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 ENTPD6O75354 484 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 DHRS3O75911 302 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 HAND1O96004 215 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGKV1D-12P01611 117 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGHV3-7P01780 117 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 ERP29P30040 261 aaKnown RBP3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 BLVRAP53004 296 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 AESQ08117 197 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 GRK1Q15835 563 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 HLA-DRB5Q30154 266 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 DEFB116Q30KQ4 102 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 CLVS2Q5SYC1 327 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF684Q5T5D7 378 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 TMEM236Q5W0B7 351 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 RPL13AP3Q6NVV1 102 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 HEPN1Q6WQI6 88 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 DRAM1Q8N682 238 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 Q8N6K4 173 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 C15orf56Q8N910 161 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR51D1Q8NGF3 324 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 LEAP2Q969E1 77 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 CEP19Q96LK0 163 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 APOL4Q9BPW4 351 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 SAV1Q9H4B6 383 aaPredicted RBP3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 RPP21Q9H633 154 aaKnown RBP3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 RBFOX1Q9NWB1 397 aaKnown RBP3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 PEF1Q9UBV8 284 aaKnown RBP3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 MRM2Q9UI43 246 aaKnown RBP3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 ENPP5Q9UJA9 477 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 BAIAP2Q9UQB8 552 aa3.5□□□□□ -1.85
RNU4-39P-201ENST00000362455 SERPINE3A8MV23 424 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF736B4DX44 427 aaPredicted RBP3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 M0QZK8 103 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 CCRL2O00421 344 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 IFNGP01579 166 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 MRPL3P09001 348 aaKnown RBP3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 CD3GP09693 182 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF3P17036 446 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 RAB4AP20338 218 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 CCL1P22362 96 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 SLC6A1P30531 599 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 BRS3P32247 399 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 RAB25P57735 213 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 ESRRGP62508 458 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 PRR3P79522 188 aaKnown RBP3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 CDK5Q00535 292 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 APOFQ13790 326 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 EBI3Q14213 229 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 DEGS2Q6QHC5 323 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms