RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 NDUFB8O95169 186 aa13.46□□□□□ -0.25
C6orf48-207ENST00000375642 IFNA17P01571 189 aa13.46□□□□□ -0.25
C6orf48-207ENST00000375642 UBE2MP61081 183 aaKnown RBP13.46□□□□□ -0.25
C6orf48-207ENST00000375642 EXOSC2Q13868 293 aaKnown RBP13.46□□□□□ -0.25
C6orf48-207ENST00000375642 OXLD1Q5BKU9 147 aa13.46□□□□□ -0.25
C6orf48-207ENST00000375642 SAMD5Q5TGI4 173 aa13.46□□□□□ -0.25
C6orf48-207ENST00000375642 Q6ZRM9 215 aa13.46□□□□□ -0.25
C6orf48-207ENST00000375642 SLC35G3Q8N808 338 aa13.46□□□□□ -0.25
C6orf48-207ENST00000375642 MCRIP2Q9BUT9 160 aaKnown RBP13.46□□□□□ -0.25
C6orf48-207ENST00000375642 PLEKHA3Q9HB20 300 aa13.46□□□□□ -0.25
C6orf48-207ENST00000375642 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.46□□□□□ -0.25
C6orf48-207ENST00000375642 PEF1Q9UBV8 284 aaKnown RBP13.46□□□□□ -0.25
C6orf48-207ENST00000375642 A0A0B4J2A0 478 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 ST8SIA3O43173 380 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 SFT2D2O95562 160 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 PPP1R1AQ13522 171 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 SLC25A24Q6NUK1 477 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 LYZL2Q7Z4W2 148 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 C1QL4Q86Z23 238 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 OR1L6Q8NGR2 347 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 GPR146Q96CH1 333 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 THYN1Q9P016 225 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 CACNG5Q9UF02 275 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 SHPKQ9UHJ6 478 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 FLVCR2Q9UPI3 526 aa13.45□□□□□ -0.26
C6orf48-207ENST00000375642 ZP3P21754 424 aa13.44□□□□□ -0.26
C6orf48-207ENST00000375642 SLURP1P55000 103 aa13.44□□□□□ -0.26
C6orf48-207ENST00000375642 ERHP84090 104 aaKnown RBP13.44□□□□□ -0.26
C6orf48-207ENST00000375642 SPINK9Q5DT21 86 aa13.44□□□□□ -0.26
C6orf48-207ENST00000375642 FAM209BQ5JX69 171 aa13.44□□□□□ -0.26
C6orf48-207ENST00000375642 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
C6orf48-207ENST00000375642 GPR61Q9BZJ8 451 aa13.44□□□□□ -0.26
C6orf48-207ENST00000375642 DMRT1Q9Y5R6 373 aa13.44□□□□□ -0.26
C6orf48-207ENST00000375642 F11RQ9Y624 299 aaKnown RBP13.44□□□□□ -0.26
C6orf48-207ENST00000375642 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.43□□□□□ -0.26
C6orf48-207ENST00000375642 SULT1A3P0DMM9 295 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 SULT1A4P0DMN0 295 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 ANKRD55Q3KP44 614 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 AARDQ4LEZ3 155 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 MZT2BQ6NZ67 158 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 LRTM2Q8N967 370 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 DCUN1D4Q92564 292 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 DLX4Q92988 240 aaPredicted RBP13.43□□□□□ -0.26
C6orf48-207ENST00000375642 EEF1AKMT3Q96AZ1 226 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 CXorf58Q96LI9 332 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 ENY2Q9NPA8 101 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 CACFD1Q9UGQ2 172 aa13.43□□□□□ -0.26
C6orf48-207ENST00000375642 PRKDCP78527 4128 aaKnown RBP13.43□□□□□ -0.26
C6orf48-207ENST00000375642 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
C6orf48-207ENST00000375642 UPK1BO75841 260 aa13.42□□□□□ -0.26
C6orf48-207ENST00000375642 TRBV12-3P01733 135 aa13.42□□□□□ -0.26
C6orf48-207ENST00000375642 ANXA7P20073 488 aaKnown RBP13.42□□□□□ -0.26
C6orf48-207ENST00000375642 HOXD3P31249 432 aaPredicted RBP13.42□□□□□ -0.26
C6orf48-207ENST00000375642 SPCS3P61009 180 aa13.42□□□□□ -0.26
C6orf48-207ENST00000375642 NMSQ5H8A3 153 aa13.42□□□□□ -0.26
C6orf48-207ENST00000375642 OR1P1Q8NH06 330 aa13.42□□□□□ -0.26
C6orf48-207ENST00000375642 OR52E5Q8NH55 327 aa13.42□□□□□ -0.26
C6orf48-207ENST00000375642 C9orf170A2RU37 121 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 SEC14L6B5MCN3 397 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 INS-IGF2F8WCM5 200 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 OVOL1O14753 267 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 IGHV3-23P01764 117 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 HLA-AP01891 365 aaKnown RBP13.41□□□□□ -0.26
C6orf48-207ENST00000375642 TCRBP04435 133 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 OR4E1P0C645 316 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 SNCAP37840 140 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 HOXA1P49639 335 aaPredicted RBP13.41□□□□□ -0.26
C6orf48-207ENST00000375642 MFAP2P55001 183 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 ASAH1Q13510 395 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 SMCO1Q147U7 214 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 BEAN1Q3B7T3 259 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 C4orf46Q504U0 113 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 KPRPQ5T749 579 aaPredicted RBP13.41□□□□□ -0.26
C6orf48-207ENST00000375642 C20orf85Q9H1P6 137 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 TBC1D24Q9ULP9 559 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 S4R3C0 116 aa13.41□□□□□ -0.26
C6orf48-207ENST00000375642 TRBV7-1A0A0A6YYK4 115 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 A0A1B0GU03 582 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 FAM240BA0A1B0GVZ2 78 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 MFSD2BA6NFX1 497 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 DHRS2Q13268 280 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 RPEL1Q2QD12 228 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 ZNF114Q8NC26 417 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 VN1R17PQ8TDU5 208 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 TMED3Q9Y3Q3 217 aa13.4□□□□□ -0.26
C6orf48-207ENST00000375642 BMPR1BO00238 502 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 CLEC3BP05452 202 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 SUB1P53999 127 aaKnown RBP eCLIP13.39□□□□□ -0.272e-24■■■■■ 52.2
C6orf48-207ENST00000375642 KLF5Q13887 457 aaPredicted RBP13.39□□□□□ -0.27
C6orf48-207ENST00000375642 TATDN3Q17R31 274 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 C9orf66Q5T8R8 295 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 CLEC19AQ6UXS0 136 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 COQ8AQ8NI60 647 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 CCDC140Q96MF4 163 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 NUDT15Q9NV35 164 aa13.39□□□□□ -0.27
C6orf48-207ENST00000375642 TRAV6A0A075B6T7 132 aa13.38□□□□□ -0.27
C6orf48-207ENST00000375642 CEBPZOSA8MTT3 80 aa13.38□□□□□ -0.27
C6orf48-207ENST00000375642 PPP5D1E7EU14 171 aa13.38□□□□□ -0.27
C6orf48-207ENST00000375642 SYNJ2BPP57105 145 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms