RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DCUN1D4Q92564 292 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 SRSF8Q9BRL6 282 aaKnown RBP5.05□□□□□ -1.6
CD44-204ENST00000279452 ZC4H2Q9NQZ6 224 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 NDUFA4L2Q9NRX3 87 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 TMEM14BQ9NUH8 114 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 PEF1Q9UBV8 284 aaKnown RBP5.05□□□□□ -1.6
CD44-204ENST00000279452 CACNG5Q9UF02 275 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 FLVCR2Q9UPI3 526 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 STAB1Q9NY15 2570 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 IGLV11-55A0A075B6I3 123 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 TRAV6A0A075B6T7 132 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 A0A0B4J293 547 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 PIGBOS1A0A0B4J2F0 54 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 MFSD2BA6NFX1 497 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 PPP5D1E7EU14 171 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 SFT2D2O95562 160 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 LY86O95711 162 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 CRYGCP07315 174 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 SULT1A3P0DMM9 295 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 SULT1A4P0DMN0 295 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 ANXA7P20073 488 aaKnown RBP5.04□□□□□ -1.6
CD44-204ENST00000279452 GPR183P32249 361 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 ARL3P36405 182 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 SYNJ2BPP57105 145 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 HSPE1P61604 102 aaKnown RBP5.04□□□□□ -1.6
CD44-204ENST00000279452 SUPT4H1P63272 117 aaKnown RBP5.04□□□□□ -1.6
CD44-204ENST00000279452 FHL3Q13643 280 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 TMEM187Q14656 261 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 TATDN3Q17R31 274 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 Q56UQ5 140 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 C9orf66Q5T8R8 295 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 MZT2BQ6NZ67 158 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 ZNF343Q6P1L6 599 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 CLEC19AQ6UXS0 136 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 LINC00299Q6ZSB3 139 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 LYZL2Q7Z4W2 148 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 ZNF429Q86V71 674 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 OR1L6Q8NGR2 347 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 COQ8AQ8NI60 647 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 ENKURQ8TC29 256 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 DLX4Q92988 240 aaPredicted RBP5.04□□□□□ -1.6
CD44-204ENST00000279452 IL22RA2Q969J5 263 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 GPR146Q96CH1 333 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 GALNT14Q96FL9 552 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 CXorf58Q96LI9 332 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 OR4C12Q96R67 309 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 ELOVL1Q9BW60 279 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 C20orf85Q9H1P6 137 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 HEYLQ9NQ87 328 aaPredicted RBP5.04□□□□□ -1.6
CD44-204ENST00000279452 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.04□□□□□ -1.6
CD44-204ENST00000279452 F11RQ9Y624 299 aaKnown RBP5.04□□□□□ -1.6
CD44-204ENST00000279452 TMEM56-RWDD3S4R434 201 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 DNHD1Q96M86 4753 aa5.04□□□□□ -1.6
CD44-204ENST00000279452 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.03□□□□□ -1.6
CD44-204ENST00000279452 TRBV7-1A0A0A6YYK4 115 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 TRBV9A0A0B4J1U6 114 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 A0A0B4J2A0 478 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 FAM240BA0A1B0GVZ2 78 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 ZNF320A2RRD8 509 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 OR2T8A6NH00 312 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 PLA2G10O15496 165 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 GGCTO75223 188 aaKnown RBP5.03□□□□□ -1.6
CD44-204ENST00000279452 UPK1BO75841 260 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 BRI3O95415 125 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 HOXB5P09067 269 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 OR4E1P0C645 316 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 BTCP35070 178 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 OPRK1P41145 380 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 SUB1P53999 127 aaKnown RBP eCLIP5.03□□□□□ -1.6
CD44-204ENST00000279452 SPCS3P61009 180 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 SMCO1Q147U7 214 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 BEAN1Q3B7T3 259 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 ANKRD55Q3KP44 614 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 FAM209BQ5JX69 171 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 PLET1Q6UQ28 207 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 HAPLN4Q86UW8 402 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 CADM3Q8N126 398 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 OR2C3Q8N628 320 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 UXS1Q8NBZ7 420 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 WFDC9Q8NEX5 89 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 CCDC140Q96MF4 163 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 FANCD2OSQ96PS1 177 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 HIPK2Q9H2X6 1198 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 NUDT15Q9NV35 164 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 PEMTQ9UBM1 199 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 SHPKQ9UHJ6 478 aa5.03□□□□□ -1.6
CD44-204ENST00000279452 PAIP2BQ9ULR5 123 aaKnown RBP5.03□□□□□ -1.6
CD44-204ENST00000279452 TENM1Q9UKZ4 2725 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 IGHV3-35A0A0C4DH35 117 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 C9orf170A2RU37 121 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 BMPR1BO00238 502 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 OR2C1O95371 312 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 SCGB1D2O95969 90 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 IFNA10P01566 189 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 IFNA21P01568 189 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 IGHV3-48P01763 117 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 TCRBP04435 133 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 CLEC3BP05452 202 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 H2AFB2P0C5Z0 115 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 P0C879 139 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms