RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Ca11O70354 328 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Cd83O88324 196 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gpr33O88416 339 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 P04945 108 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Lcn12Q6JVL5 193 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gpr4Q8BUD0 365 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Pomt1Q8R2R1 746 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr266Q8VFC3 316 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr272Q8VGA0 319 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Loxl4Q924C6 757 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Errfi1Q99JZ7 461 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Atg12Q9CQY1 141 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Dph7Q9CYU6 477 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Arv1Q9D0U9 266 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Rab1bQ9D1G1 201 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Six6Q9QZ28 246 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Fbn1Q61554 2873 aaKnown RBP7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Trbv23A0A0A6YWQ1 115 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn2r107E9PZJ7 861 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm3250E9Q1M3 230 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr520E9Q518 316 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 NnmtO55239 264 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Lyz2P08905 148 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ptbp1P17225 527 aaKnown RBP6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Pnliprp2P17892 482 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Htr5aP30966 357 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 PvalbP32848 110 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ube2g2P60605 165 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Fam219bQ14DQ1 197 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gng7Q61016 68 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Zfp955aQ80XR7 545 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Hif1anQ8BLR9 349 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Stfa2l1Q8BWM3 103 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r21Q8R2C6 297 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Prodh2Q8VCZ9 456 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Mrps23Q8VE22 177 aaKnown RBP6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 B3gnt9Q8VI16 399 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ms4a3Q920C4 213 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Mcts2Q9CQ21 181 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Dnmt3lQ9CWR8 421 aaKnown RBP6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Wdr20Q9D5R2 567 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 2200002D01RikQ9D809 114 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ccdc107Q9DCC3 242 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ighv5-8A0A075B676 92 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Spaca5A2AE20 160 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r124D3YTX4 307 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ankrd29D3YVV3 309 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 C2cd6E9Q152 557 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 H2-M11F6U8V3 335 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1329L7MTV4 313 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ascl4M0QW46 144 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Tbx15O70306 602 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Zfp13P10754 512 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gabra2P26048 451 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 StomP54116 284 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Sec61a1P61620 476 aaKnown RBP6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gng8P63078 70 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Polr1dP97304 133 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Siah2Q06986 325 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Pdp1Q3UV70 538 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Pafah1b3Q61205 232 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Mtch1Q791T5 389 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr70Q80ZX9 316 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Wdfy2Q8BUB4 400 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Bricd5Q8BV89 174 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Actrt3Q8BXF8 369 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Rcc1Q8VE37 421 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Cacng6Q8VHW3 260 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Cd209cQ91ZW9 178 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Tmem126aQ9D8Y1 196 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 1700013G24RikQ9DAC6 286 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Zfp869Q9DC47 529 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 NgbQ9ER97 151 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 Smco4Q9JIS3 59 aa6.99□□□□□ -1.29
Trim39-205ENSMUST00000173369 BC035044E0CXF8 138 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Npffr1E9Q468 432 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 LoxP28301 411 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gng3P63216 75 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm11232Q5SPI8 295 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Sntb2Q61235 520 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Q6PIU9 354 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1042Q7TR81 313 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Wdr82Q8BFQ4 313 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Snapc5Q8R2K7 98 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Znrf1Q91V17 227 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr73Q920P2 313 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Fam162bQ9CX19 157 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm29276A0A087WNW5 222 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm21996A0A087WSS9 222 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Lrrc3cA0A1B0GRI5 255 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r174E9PYW5 313 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r173E9Q8V7 313 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 H2-T10F6T1I5 379 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Oosp3G5E8D7 195 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ighv3-6P18531 116 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 ElobP62869 118 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Zfp72Q0VFY0 435 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 SlaQ60898 281 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Npy6rQ61212 371 aa6.98□□□□□ -1.29
Trim39-205ENSMUST00000173369 Glra1Q64018 457 aa6.98□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 72.8 ms