Protein–RNA interactions for Protein: Q9CWR8

Dnmt3l, DNA (cytosine-5)-methyltransferase 3-like, mousemouse

Known RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3lQ9CWR8 Gm25239-201ENSMUST00000174915 86 ntBASIC30.55■■■□□ 2.48
Dnmt3lQ9CWR8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Dnmt3lQ9CWR8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Dnmt3lQ9CWR8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Dnmt3lQ9CWR8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Dnmt3lQ9CWR8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Dnmt3lQ9CWR8 Psd-208ENSMUST00000224556 2034 ntBASIC28.19■■■□□ 2.1
Dnmt3lQ9CWR8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Dnmt3lQ9CWR8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Dnmt3lQ9CWR8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Dnmt3lQ9CWR8 Gm15042-201ENSMUST00000120212 883 ntBASIC27.35■■□□□ 1.97
Dnmt3lQ9CWR8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Dnmt3lQ9CWR8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Dnmt3lQ9CWR8 Gm15045-201ENSMUST00000117359 883 ntBASIC26.87■■□□□ 1.89
Dnmt3lQ9CWR8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Dnmt3lQ9CWR8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.82■■□□□ 1.88
Dnmt3lQ9CWR8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Dnmt3lQ9CWR8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Dnmt3lQ9CWR8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Dnmt3lQ9CWR8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Dnmt3lQ9CWR8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Dnmt3lQ9CWR8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Dnmt3lQ9CWR8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Dnmt3lQ9CWR8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Dnmt3lQ9CWR8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Dnmt3lQ9CWR8 Gm24109-201ENSMUST00000175489 103 ntBASIC26.18■■□□□ 1.78
Dnmt3lQ9CWR8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Dnmt3lQ9CWR8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Dnmt3lQ9CWR8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Dnmt3lQ9CWR8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Dnmt3lQ9CWR8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.05■■□□□ 1.76
Dnmt3lQ9CWR8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Dnmt3lQ9CWR8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Dnmt3lQ9CWR8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Dnmt3lQ9CWR8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.86■■□□□ 1.73
Dnmt3lQ9CWR8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Dnmt3lQ9CWR8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Dnmt3lQ9CWR8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Dnmt3lQ9CWR8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Dnmt3lQ9CWR8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Dnmt3lQ9CWR8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Dnmt3lQ9CWR8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Dnmt3lQ9CWR8 Gm23366-201ENSMUST00000175022 89 ntBASIC25.61■■□□□ 1.69
Dnmt3lQ9CWR8 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.61■■□□□ 1.69
Dnmt3lQ9CWR8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.6■■□□□ 1.69
Dnmt3lQ9CWR8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Dnmt3lQ9CWR8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.5■■□□□ 1.67
Dnmt3lQ9CWR8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Dnmt3lQ9CWR8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Dnmt3lQ9CWR8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Dnmt3lQ9CWR8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.41■■□□□ 1.66
Dnmt3lQ9CWR8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Dnmt3lQ9CWR8 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.36■■□□□ 1.65
Dnmt3lQ9CWR8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Dnmt3lQ9CWR8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Dnmt3lQ9CWR8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Dnmt3lQ9CWR8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Dnmt3lQ9CWR8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.14■■□□□ 1.62
Dnmt3lQ9CWR8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Dnmt3lQ9CWR8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
Dnmt3lQ9CWR8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Dnmt3lQ9CWR8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25■■□□□ 1.59
Dnmt3lQ9CWR8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Dnmt3lQ9CWR8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Dnmt3lQ9CWR8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Dnmt3lQ9CWR8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Dnmt3lQ9CWR8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Dnmt3lQ9CWR8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.71■■□□□ 1.55
Dnmt3lQ9CWR8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Dnmt3lQ9CWR8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Dnmt3lQ9CWR8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Dnmt3lQ9CWR8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Dnmt3lQ9CWR8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Dnmt3lQ9CWR8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Dnmt3lQ9CWR8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Dnmt3lQ9CWR8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Dnmt3lQ9CWR8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Dnmt3lQ9CWR8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Dnmt3lQ9CWR8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Dnmt3lQ9CWR8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
Dnmt3lQ9CWR8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Dnmt3lQ9CWR8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Dnmt3lQ9CWR8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Dnmt3lQ9CWR8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Dnmt3lQ9CWR8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Dnmt3lQ9CWR8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.28■■□□□ 1.48
Dnmt3lQ9CWR8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Dnmt3lQ9CWR8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Dnmt3lQ9CWR8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Dnmt3lQ9CWR8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Dnmt3lQ9CWR8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.21■■□□□ 1.47
Dnmt3lQ9CWR8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.18■■□□□ 1.46
Dnmt3lQ9CWR8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.17■■□□□ 1.46
Dnmt3lQ9CWR8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Dnmt3lQ9CWR8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Dnmt3lQ9CWR8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.13■■□□□ 1.45
Dnmt3lQ9CWR8 Gm27325-201ENSMUST00000175467 74 ntBASIC24.11■■□□□ 1.45
Dnmt3lQ9CWR8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Dnmt3lQ9CWR8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Dnmt3lQ9CWR8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms