Protein–RNA interactions for Protein: Q8R2K7

Snapc5, snRNA-activating protein complex subunit 5, mousemouse

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc5Q8R2K7 Gm25239-201ENSMUST00000174915 86 ntBASIC31.22■■■□□ 2.59
Snapc5Q8R2K7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Snapc5Q8R2K7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Snapc5Q8R2K7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Snapc5Q8R2K7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Snapc5Q8R2K7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Snapc5Q8R2K7 Gm15042-201ENSMUST00000120212 883 ntBASIC27.66■■■□□ 2.02
Snapc5Q8R2K7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Snapc5Q8R2K7 Psd-208ENSMUST00000224556 2034 ntBASIC27.35■■□□□ 1.97
Snapc5Q8R2K7 Gm15045-201ENSMUST00000117359 883 ntBASIC27.04■■□□□ 1.92
Snapc5Q8R2K7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Snapc5Q8R2K7 Gm24109-201ENSMUST00000175489 103 ntBASIC26.83■■□□□ 1.89
Snapc5Q8R2K7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Snapc5Q8R2K7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Snapc5Q8R2K7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.32■■□□□ 1.8
Snapc5Q8R2K7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Snapc5Q8R2K7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Snapc5Q8R2K7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Snapc5Q8R2K7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Snapc5Q8R2K7 Gm23366-201ENSMUST00000175022 89 ntBASIC26.18■■□□□ 1.78
Snapc5Q8R2K7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Snapc5Q8R2K7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Snapc5Q8R2K7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Snapc5Q8R2K7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Snapc5Q8R2K7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Snapc5Q8R2K7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Snapc5Q8R2K7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Snapc5Q8R2K7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Snapc5Q8R2K7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Snapc5Q8R2K7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Snapc5Q8R2K7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Snapc5Q8R2K7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Snapc5Q8R2K7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Snapc5Q8R2K7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Snapc5Q8R2K7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Snapc5Q8R2K7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.64■■□□□ 1.7
Snapc5Q8R2K7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Snapc5Q8R2K7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.42■■□□□ 1.66
Snapc5Q8R2K7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Snapc5Q8R2K7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.37■■□□□ 1.65
Snapc5Q8R2K7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Snapc5Q8R2K7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Snapc5Q8R2K7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Snapc5Q8R2K7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.95■■□□□ 1.58
Snapc5Q8R2K7 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.91■■□□□ 1.58
Snapc5Q8R2K7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Snapc5Q8R2K7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Snapc5Q8R2K7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.84■■□□□ 1.57
Snapc5Q8R2K7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.83■■□□□ 1.57
Snapc5Q8R2K7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Snapc5Q8R2K7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Snapc5Q8R2K7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Snapc5Q8R2K7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
Snapc5Q8R2K7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Snapc5Q8R2K7 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.58■■□□□ 1.52
Snapc5Q8R2K7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Snapc5Q8R2K7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Snapc5Q8R2K7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Snapc5Q8R2K7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.54■■□□□ 1.52
Snapc5Q8R2K7 Gm25238-201ENSMUST00000174914 89 ntBASIC24.5■■□□□ 1.51
Snapc5Q8R2K7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.49■■□□□ 1.51
Snapc5Q8R2K7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Snapc5Q8R2K7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Snapc5Q8R2K7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Snapc5Q8R2K7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Snapc5Q8R2K7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Snapc5Q8R2K7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Snapc5Q8R2K7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Snapc5Q8R2K7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Snapc5Q8R2K7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Snapc5Q8R2K7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Snapc5Q8R2K7 Gm27325-201ENSMUST00000175467 74 ntBASIC24.29■■□□□ 1.48
Snapc5Q8R2K7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Snapc5Q8R2K7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Snapc5Q8R2K7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Snapc5Q8R2K7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.21■■□□□ 1.47
Snapc5Q8R2K7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.2■■□□□ 1.46
Snapc5Q8R2K7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Snapc5Q8R2K7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
Snapc5Q8R2K7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Snapc5Q8R2K7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.14■■□□□ 1.45
Snapc5Q8R2K7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Snapc5Q8R2K7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
Snapc5Q8R2K7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Snapc5Q8R2K7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Snapc5Q8R2K7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Snapc5Q8R2K7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Snapc5Q8R2K7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Snapc5Q8R2K7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Snapc5Q8R2K7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Snapc5Q8R2K7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Snapc5Q8R2K7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.91■■□□□ 1.42
Snapc5Q8R2K7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.88■■□□□ 1.41
Snapc5Q8R2K7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Snapc5Q8R2K7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Snapc5Q8R2K7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Snapc5Q8R2K7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Snapc5Q8R2K7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Snapc5Q8R2K7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.73■■□□□ 1.39
Snapc5Q8R2K7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms