Protein–RNA interactions for Protein: E9Q8V7

Vmn1r173, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r173E9Q8V7 Gm25239-201ENSMUST00000174915 86 ntBASIC30.45■■■□□ 2.47
Vmn1r173E9Q8V7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Vmn1r173E9Q8V7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Vmn1r173E9Q8V7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Vmn1r173E9Q8V7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Vmn1r173E9Q8V7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Vmn1r173E9Q8V7 Psd-208ENSMUST00000224556 2034 ntBASIC27.37■■□□□ 1.97
Vmn1r173E9Q8V7 Gm15042-201ENSMUST00000120212 883 ntBASIC27.16■■□□□ 1.94
Vmn1r173E9Q8V7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Vmn1r173E9Q8V7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Vmn1r173E9Q8V7 Gm15045-201ENSMUST00000117359 883 ntBASIC26.61■■□□□ 1.85
Vmn1r173E9Q8V7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Vmn1r173E9Q8V7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Vmn1r173E9Q8V7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Vmn1r173E9Q8V7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.34■■□□□ 1.81
Vmn1r173E9Q8V7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vmn1r173E9Q8V7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vmn1r173E9Q8V7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Vmn1r173E9Q8V7 Gm24109-201ENSMUST00000175489 103 ntBASIC26.11■■□□□ 1.77
Vmn1r173E9Q8V7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Vmn1r173E9Q8V7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Vmn1r173E9Q8V7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Vmn1r173E9Q8V7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Vmn1r173E9Q8V7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Vmn1r173E9Q8V7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Vmn1r173E9Q8V7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Vmn1r173E9Q8V7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Vmn1r173E9Q8V7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Vmn1r173E9Q8V7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.58■■□□□ 1.68
Vmn1r173E9Q8V7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vmn1r173E9Q8V7 Gm23366-201ENSMUST00000175022 89 ntBASIC25.53■■□□□ 1.68
Vmn1r173E9Q8V7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vmn1r173E9Q8V7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Vmn1r173E9Q8V7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Vmn1r173E9Q8V7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.37■■□□□ 1.65
Vmn1r173E9Q8V7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Vmn1r173E9Q8V7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Vmn1r173E9Q8V7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Vmn1r173E9Q8V7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Vmn1r173E9Q8V7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vmn1r173E9Q8V7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vmn1r173E9Q8V7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Vmn1r173E9Q8V7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.97■■□□□ 1.59
Vmn1r173E9Q8V7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.96■■□□□ 1.59
Vmn1r173E9Q8V7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Vmn1r173E9Q8V7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.93■■□□□ 1.58
Vmn1r173E9Q8V7 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.79■■□□□ 1.56
Vmn1r173E9Q8V7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r173E9Q8V7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Vmn1r173E9Q8V7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Vmn1r173E9Q8V7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.56■■□□□ 1.52
Vmn1r173E9Q8V7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r173E9Q8V7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vmn1r173E9Q8V7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vmn1r173E9Q8V7 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.47■■□□□ 1.51
Vmn1r173E9Q8V7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Vmn1r173E9Q8V7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r173E9Q8V7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vmn1r173E9Q8V7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vmn1r173E9Q8V7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.25■■□□□ 1.47
Vmn1r173E9Q8V7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vmn1r173E9Q8V7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Vmn1r173E9Q8V7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Vmn1r173E9Q8V7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vmn1r173E9Q8V7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Vmn1r173E9Q8V7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r173E9Q8V7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.14■■□□□ 1.45
Vmn1r173E9Q8V7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Vmn1r173E9Q8V7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Vmn1r173E9Q8V7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Vmn1r173E9Q8V7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
Vmn1r173E9Q8V7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Vmn1r173E9Q8V7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Vmn1r173E9Q8V7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Vmn1r173E9Q8V7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Vmn1r173E9Q8V7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.94■■□□□ 1.42
Vmn1r173E9Q8V7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vmn1r173E9Q8V7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Vmn1r173E9Q8V7 Gm27325-201ENSMUST00000175467 74 ntBASIC23.87■■□□□ 1.41
Vmn1r173E9Q8V7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
Vmn1r173E9Q8V7 Gm25238-201ENSMUST00000174914 89 ntBASIC23.84■■□□□ 1.41
Vmn1r173E9Q8V7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vmn1r173E9Q8V7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.8■■□□□ 1.4
Vmn1r173E9Q8V7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vmn1r173E9Q8V7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vmn1r173E9Q8V7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vmn1r173E9Q8V7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vmn1r173E9Q8V7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vmn1r173E9Q8V7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.66■■□□□ 1.38
Vmn1r173E9Q8V7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Vmn1r173E9Q8V7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vmn1r173E9Q8V7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vmn1r173E9Q8V7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vmn1r173E9Q8V7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vmn1r173E9Q8V7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Vmn1r173E9Q8V7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vmn1r173E9Q8V7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r173E9Q8V7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Vmn1r173E9Q8V7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vmn1r173E9Q8V7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms