RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 SEC16AO15027 2179 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 PDLIM4P50479 330 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 LHFPL1Q86WI0 220 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 CCL19Q99731 98 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 COTL1Q14019 142 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 A6NDN8 102 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 MIR17HGQ75NE6 70 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 CBLN1P23435 193 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 NMUP48645 174 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 AP5S1Q9NUS5 200 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 A0A087WWC5 75 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 BTF3P20290 206 aaKnown RBP13.69□□□□□ -0.22
BRD3-201ENST00000303407 ANOS1P23352 680 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 RPS20P60866 119 aaKnown RBP13.69□□□□□ -0.22
BRD3-201ENST00000303407 SRSF7Q16629 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
BRD3-201ENST00000303407 EEF1AKMT3Q96AZ1 226 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 DCAF16Q9NXF7 216 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 EBLN2Q6P2I7 272 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 TMEM183AQ8IXX5 376 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 OR4B1Q8NGF8 309 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 SDF2L1Q9HCN8 221 aa13.69□□□□□ -0.22
BRD3-201ENST00000303407 IGKV1D-33P01593 117 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 IGKV1-33P01594 117 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 SAA1P0DJI8 122 aaPredicted RBP13.68□□□□□ -0.22
BRD3-201ENST00000303407 TCF20Q9UGU0 1960 aaKnown RBP13.68□□□□□ -0.22
BRD3-201ENST00000303407 SUPT4H1P63272 117 aaKnown RBP13.68□□□□□ -0.22
BRD3-201ENST00000303407 CX3CL1P78423 397 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 RELQ04864 619 aaPredicted RBP13.68□□□□□ -0.22
BRD3-201ENST00000303407 ABCA7Q8IZY2 2146 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 SLC17A3O00476 420 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 CD55P08174 381 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 CCL3L1P16619 93 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 QRFPP83859 136 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 FOXF2Q12947 444 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 IL36BQ9NZH7 164 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 S4R3C0 116 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 FRMPD3Q5JV73 1810 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 LEPROTL1O95214 131 aa13.68□□□□□ -0.22
BRD3-201ENST00000303407 LRTM2Q8N967 370 aa13.67□□□□□ -0.22
BRD3-201ENST00000303407 C15orf61A6NNL5 157 aa13.67□□□□□ -0.22
BRD3-201ENST00000303407 LCN2P80188 198 aa13.67□□□□□ -0.22
BRD3-201ENST00000303407 ID3Q02535 119 aa13.67□□□□□ -0.22
BRD3-201ENST00000303407 GATA2P23769 480 aaPredicted RBP13.67□□□□□ -0.22
BRD3-201ENST00000303407 ATP5J2P56134 94 aa13.67□□□□□ -0.22
BRD3-201ENST00000303407 UPK2O00526 184 aa13.67□□□□□ -0.22
BRD3-201ENST00000303407 PMCHL1Q16048 86 aa13.67□□□□□ -0.22
BRD3-201ENST00000303407 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
BRD3-201ENST00000303407 SNCGO76070 127 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 LYRM7Q5U5X0 104 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 DPM3Q9P2X0 92 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 RBFOX2O43251 390 aaKnown RBP eCLIP13.66□□□□□ -0.22
BRD3-201ENST00000303407 OR9G9P0C7N8 305 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 DDTP30046 118 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 IGHV3-35A0A0C4DH35 117 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 B3GALT5-AS1P59052 145 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 FOXA2Q9Y261 457 aaPredicted RBP13.66□□□□□ -0.22
BRD3-201ENST00000303407 FOXH1O75593 365 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 TANC1Q9C0D5 1861 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 RNASEH2CQ8TDP1 164 aaKnown RBP13.66□□□□□ -0.22
BRD3-201ENST00000303407 CYTL1Q9NRR1 136 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 DMRT1Q9Y5R6 373 aa13.66□□□□□ -0.22
BRD3-201ENST00000303407 PEX7O00628 323 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 GPX4P36969 197 aaPredicted RBP13.65□□□□□ -0.22
BRD3-201ENST00000303407 PSMB2P49721 201 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 COL5A1-AS1Q5SY13 56 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 BMPERQ8N8U9 685 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 NEU4Q8WWR8 484 aaPredicted RBP13.65□□□□□ -0.22
BRD3-201ENST00000303407 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 NBEAP1P0C6P0 100 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 HBBP68871 147 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 SRSF9Q13242 221 aaKnown RBP eCLIP13.65□□□□□ -0.22
BRD3-201ENST00000303407 FAM209BQ5JX69 171 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 PLXNA2O75051 1894 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 ATG101Q9BSB4 218 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 NPPCP23582 126 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 MBNL2Q5VZF2 373 aaKnown RBP13.65□□□□□ -0.22
BRD3-201ENST00000303407 PLXNA4Q9HCM2 1894 aa13.65□□□□□ -0.22
BRD3-201ENST00000303407 PRB3Q04118 309 aaPredicted RBP13.64□□□□□ -0.23
BRD3-201ENST00000303407 PET117Q6UWS5 81 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
BRD3-201ENST00000303407 HINT1P49773 126 aaPredicted RBP13.64□□□□□ -0.23
BRD3-201ENST00000303407 TEX45Q8NA69 505 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 SYT8Q8NBV8 401 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 CHODLQ9H9P2 273 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 E9PQ18 207 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 IL18BPO95998 194 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 RAB9AP51151 201 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 RPL23P62829 140 aaKnown RBP13.64□□□□□ -0.23
BRD3-201ENST00000303407 PLAURQ03405 335 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 CACNG8Q8WXS5 425 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 FOLR2P14207 255 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 DUTP33316 252 aaKnown RBP13.64□□□□□ -0.23
BRD3-201ENST00000303407 CCL20P78556 96 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 ZCCHC24Q8N2G6 241 aaKnown RBP13.64□□□□□ -0.23
BRD3-201ENST00000303407 IMMP2LQ96T52 175 aa13.64□□□□□ -0.23
BRD3-201ENST00000303407 CA7P43166 264 aa13.63□□□□□ -0.23
BRD3-201ENST00000303407 FAM106AQ4KMX7 169 aa13.63□□□□□ -0.23
BRD3-201ENST00000303407 OR52E5Q8NH55 327 aa13.63□□□□□ -0.23
BRD3-201ENST00000303407 RSPO3Q9BXY4 272 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms