RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 ReckQ9Z0J1 971 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr102B2RT33 308 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 CymB7ZWD6 379 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fabp4P04117 132 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 SelplgQ62170 397 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 AfmidQ8K4H1 305 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Nfam1Q8R4V1 264 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1214A2ATG3 311 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gpr27O54897 379 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1537P34983 314 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Slc45a2P58355 530 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tmem71Q149F5 287 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fxyd3Q61835 88 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Vstm2lQ6PDS0 220 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 HikeshiQ9DD02 197 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 KrasP32883 189 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm1527Q3V0P3 650 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Bud31Q6PGH1 103 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Anapc10Q8K2H6 185 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr632Q9EPN9 317 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Pus1Q9WU56 423 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Rbm38Q62176 237 aaKnown RBP13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Vma21Q78T54 101 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr504Q7TRU7 318 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 6030452D12RikQ8CD33 222 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1324Q8VEU7 332 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fyttd1Q91Z49 317 aaKnown RBP13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 G530012D18RikJ3QK25 139 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tcstv1O70619 171 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Scrt2Q8BTH6 311 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1155Q8VFR3 314 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr483Q8VG05 315 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1038Q8VGS1 319 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Acp1Q9D358 158 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Vmn1r171Q9EPS6 316 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Lbx1P52955 282 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Plk3Q60806 631 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Cmc2Q8K199 79 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Arrdc2Q9D668 407 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Trappc2lQ9JME7 139 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Vsig2Q9Z109 328 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm20918J3QN17 227 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm26965M0QWH4 86 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Degs1O09005 323 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr180Q7TS48 317 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr50Q8VGK5 312 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Nhp2Q9CRB2 153 aaKnown RBP13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Rab32Q9CZE3 223 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Smdt1Q9DB10 107 aa13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Actl6aQ9Z2N8 429 aaKnown RBP13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Obsl1D3YYU8 1804 aaKnown RBP13.54□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tex38A2A8T7 201 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Vmn1r60G3UY47 300 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 CrpP14847 225 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Cd7P50283 210 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fxyd6Q9D164 94 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 RhodP97348 210 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Lhfpl4Q5U4E0 247 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 ApooQ9DCZ4 198 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tcl1b1P56840 116 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Taar5Q5QD14 337 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Psmb6Q60692 238 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Q8C3M9 231 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Lrrc25Q8K1T1 297 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Pitpnc1Q8K4R4 332 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 BmfQ91ZE9 185 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Cryba2Q9JJV1 197 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 S1pr3Q9Z0U9 378 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Mpc1P63030 109 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr963Q7TRA9 311 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Vmn1r237Q8R296 289 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Shisa5Q9D7I0 235 aa13.53□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Alms1Q8K4E0 3251 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Slc35d1A2AKQ0 355 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr251E9Q891 316 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Mcpt8P43430 247 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Crisp3Q03402 241 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Smug1Q6P5C5 279 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 C1saQ8CG14 688 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1044Q8VGR9 314 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Ube2v2Q9D2M8 145 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Irak1bp1Q9ESJ7 259 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Rbfox1Q9JJ43 396 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fcgr4A0A0B4J1G0 249 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Zfp433A0A0J9YUD4 600 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm32687A0A1W2P6H7 600 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Rps16P14131 146 aaKnown RBP13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Sftpa1P35242 248 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr996Q7TRA0 314 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1445Q8VFW9 314 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Mrpl18Q9CQL5 180 aa13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fam103a1Q9CQY2 119 aaKnown RBP13.52□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Ints1Q6P4S8 2195 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Samt3A2ARK7 233 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Rasl12Q08AT1 266 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Wfdc6aQ3UW55 136 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 IslrQ6GU68 428 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 RflnaQ7TS73 204 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Pla2g16Q8R3U1 162 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 CenpvQ9CXS4 252 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms