Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm25239-201ENSMUST00000174915 86 ntBASIC40.19■■■■■ 4.02
Lbx1P52955 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Lbx1P52955 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Lbx1P52955 Gm24109-201ENSMUST00000175489 103 ntBASIC35.5■■■■□ 3.27
Lbx1P52955 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Lbx1P52955 Gm15042-201ENSMUST00000120212 883 ntBASIC34.04■■■■□ 3.04
Lbx1P52955 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
Lbx1P52955 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Lbx1P52955 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Lbx1P52955 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.46■■■□□ 2.95
Lbx1P52955 Gm23366-201ENSMUST00000175022 89 ntBASIC33.44■■■□□ 2.94
Lbx1P52955 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Lbx1P52955 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.23■■■□□ 2.91
Lbx1P52955 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Lbx1P52955 Gm15045-201ENSMUST00000117359 883 ntBASIC33.04■■■□□ 2.88
Lbx1P52955 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.9■■■□□ 2.86
Lbx1P52955 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Lbx1P52955 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.23■■■□□ 2.75
Lbx1P52955 Gm25238-201ENSMUST00000174914 89 ntBASIC32.07■■■□□ 2.72
Lbx1P52955 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Lbx1P52955 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Lbx1P52955 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Lbx1P52955 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.5■■■□□ 2.63
Lbx1P52955 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Lbx1P52955 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
Lbx1P52955 Gm25262-201ENSMUST00000174934 133 ntBASIC31.33■■■□□ 2.61
Lbx1P52955 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Lbx1P52955 Gm26115-201ENSMUST00000175605 87 ntBASIC31.03■■■□□ 2.56
Lbx1P52955 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.96■■■□□ 2.55
Lbx1P52955 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.91■■■□□ 2.54
Lbx1P52955 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.83■■■□□ 2.53
Lbx1P52955 Gm8109-201ENSMUST00000194076 746 ntBASIC30.71■■■□□ 2.51
Lbx1P52955 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Lbx1P52955 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Lbx1P52955 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.55■■■□□ 2.48
Lbx1P52955 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Lbx1P52955 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.34■■■□□ 2.45
Lbx1P52955 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.17■■■□□ 2.42
Lbx1P52955 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Lbx1P52955 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lbx1P52955 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Lbx1P52955 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.9■■■□□ 2.38
Lbx1P52955 Rab21-202ENSMUST00000218831 843 ntBASIC29.81■■■□□ 2.36
Lbx1P52955 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Lbx1P52955 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Lbx1P52955 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Lbx1P52955 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Lbx1P52955 Gm27325-201ENSMUST00000175467 74 ntBASIC29.59■■■□□ 2.33
Lbx1P52955 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.59■■■□□ 2.33
Lbx1P52955 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Lbx1P52955 Gm24804-201ENSMUST00000174982 85 ntBASIC29.52■■■□□ 2.32
Lbx1P52955 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Lbx1P52955 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.41■■■□□ 2.3
Lbx1P52955 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.34■■■□□ 2.29
Lbx1P52955 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Lbx1P52955 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Lbx1P52955 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.25■■■□□ 2.27
Lbx1P52955 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Lbx1P52955 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Lbx1P52955 Zfp131-205ENSMUST00000223812 663 ntBASIC29.16■■■□□ 2.26
Lbx1P52955 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
Lbx1P52955 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Lbx1P52955 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Lbx1P52955 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Lbx1P52955 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.03■■■□□ 2.24
Lbx1P52955 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.03■■■□□ 2.24
Lbx1P52955 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Lbx1P52955 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
Lbx1P52955 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.94■■■□□ 2.22
Lbx1P52955 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Lbx1P52955 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Lbx1P52955 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.9■■■□□ 2.22
Lbx1P52955 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Lbx1P52955 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Lbx1P52955 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Lbx1P52955 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
Lbx1P52955 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Lbx1P52955 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Lbx1P52955 Gm27322-201ENSMUST00000184007 104 ntBASIC28.7■■■□□ 2.18
Lbx1P52955 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Lbx1P52955 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Lbx1P52955 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Lbx1P52955 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.65■■■□□ 2.18
Lbx1P52955 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Lbx1P52955 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.61■■■□□ 2.17
Lbx1P52955 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Lbx1P52955 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.53■■■□□ 2.16
Lbx1P52955 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lbx1P52955 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Lbx1P52955 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Lbx1P52955 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lbx1P52955 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Lbx1P52955 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.46■■■□□ 2.15
Lbx1P52955 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.45■■■□□ 2.14
Lbx1P52955 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.43■■■□□ 2.14
Lbx1P52955 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.39■■■□□ 2.14
Lbx1P52955 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.31■■■□□ 2.12
Lbx1P52955 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.29■■■□□ 2.12
Lbx1P52955 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Lbx1P52955 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms