Protein–RNA interactions for Protein: Q8R296

Vmn1r237, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r237Q8R296 Gm25239-201ENSMUST00000174915 86 ntBASIC31.33■■■□□ 2.61
Vmn1r237Q8R296 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Vmn1r237Q8R296 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Vmn1r237Q8R296 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Vmn1r237Q8R296 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Vmn1r237Q8R296 Gm15042-201ENSMUST00000120212 883 ntBASIC27.75■■■□□ 2.03
Vmn1r237Q8R296 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
Vmn1r237Q8R296 Gm15045-201ENSMUST00000117359 883 ntBASIC27.13■■□□□ 1.93
Vmn1r237Q8R296 Gm24109-201ENSMUST00000175489 103 ntBASIC26.95■■□□□ 1.9
Vmn1r237Q8R296 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Vmn1r237Q8R296 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Vmn1r237Q8R296 Psd-208ENSMUST00000224556 2034 ntBASIC26.49■■□□□ 1.83
Vmn1r237Q8R296 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Vmn1r237Q8R296 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.36■■□□□ 1.81
Vmn1r237Q8R296 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Vmn1r237Q8R296 Gm23366-201ENSMUST00000175022 89 ntBASIC26.26■■□□□ 1.79
Vmn1r237Q8R296 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vmn1r237Q8R296 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Vmn1r237Q8R296 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Vmn1r237Q8R296 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Vmn1r237Q8R296 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Vmn1r237Q8R296 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Vmn1r237Q8R296 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Vmn1r237Q8R296 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Vmn1r237Q8R296 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Vmn1r237Q8R296 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Vmn1r237Q8R296 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.7■■□□□ 1.7
Vmn1r237Q8R296 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Vmn1r237Q8R296 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Vmn1r237Q8R296 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Vmn1r237Q8R296 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.46■■□□□ 1.67
Vmn1r237Q8R296 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.4■■□□□ 1.66
Vmn1r237Q8R296 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Vmn1r237Q8R296 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Vmn1r237Q8R296 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Vmn1r237Q8R296 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vmn1r237Q8R296 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Vmn1r237Q8R296 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.97■■□□□ 1.59
Vmn1r237Q8R296 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.93■■□□□ 1.58
Vmn1r237Q8R296 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vmn1r237Q8R296 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Vmn1r237Q8R296 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Vmn1r237Q8R296 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Vmn1r237Q8R296 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Vmn1r237Q8R296 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Vmn1r237Q8R296 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.65■■□□□ 1.54
Vmn1r237Q8R296 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.62■■□□□ 1.53
Vmn1r237Q8R296 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Vmn1r237Q8R296 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Vmn1r237Q8R296 Gm25238-201ENSMUST00000174914 89 ntBASIC24.58■■□□□ 1.53
Vmn1r237Q8R296 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.58■■□□□ 1.52
Vmn1r237Q8R296 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Vmn1r237Q8R296 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r237Q8R296 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r237Q8R296 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r237Q8R296 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Vmn1r237Q8R296 Gm27325-201ENSMUST00000175467 74 ntBASIC24.35■■□□□ 1.49
Vmn1r237Q8R296 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Vmn1r237Q8R296 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Vmn1r237Q8R296 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vmn1r237Q8R296 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.28■■□□□ 1.48
Vmn1r237Q8R296 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vmn1r237Q8R296 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.26■■□□□ 1.47
Vmn1r237Q8R296 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.46
Vmn1r237Q8R296 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
Vmn1r237Q8R296 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Vmn1r237Q8R296 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r237Q8R296 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.16■■□□□ 1.46
Vmn1r237Q8R296 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Vmn1r237Q8R296 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vmn1r237Q8R296 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Vmn1r237Q8R296 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vmn1r237Q8R296 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r237Q8R296 Gm42596-201ENSMUST00000196305 1958 ntBASIC24■■□□□ 1.43
Vmn1r237Q8R296 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vmn1r237Q8R296 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Vmn1r237Q8R296 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.96■■□□□ 1.43
Vmn1r237Q8R296 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.95■■□□□ 1.42
Vmn1r237Q8R296 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Vmn1r237Q8R296 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vmn1r237Q8R296 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.77■■□□□ 1.4
Vmn1r237Q8R296 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Vmn1r237Q8R296 Rab21-202ENSMUST00000218831 843 ntBASIC23.72■■□□□ 1.39
Vmn1r237Q8R296 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vmn1r237Q8R296 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vmn1r237Q8R296 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vmn1r237Q8R296 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Vmn1r237Q8R296 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vmn1r237Q8R296 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.6■■□□□ 1.37
Vmn1r237Q8R296 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vmn1r237Q8R296 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.56■■□□□ 1.36
Vmn1r237Q8R296 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Vmn1r237Q8R296 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.48■■□□□ 1.35
Vmn1r237Q8R296 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Vmn1r237Q8R296 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vmn1r237Q8R296 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vmn1r237Q8R296 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vmn1r237Q8R296 Gm25262-201ENSMUST00000174934 133 ntBASIC23.45■■□□□ 1.34
Vmn1r237Q8R296 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Vmn1r237Q8R296 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms