RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 SEMA5BQ9P283 1151 aa15.08■□□□□ 0.01
CTSB-202ENST00000353047 CEP295Q9C0D2 2601 aa15.08■□□□□ 0
CTSB-202ENST00000353047 IGHV3-72A0A0B4J1Y9 119 aa15.08■□□□□ 0
CTSB-202ENST00000353047 RHOBP62745 196 aa15.08■□□□□ 0
CTSB-202ENST00000353047 VWA1Q6PCB0 445 aa15.08■□□□□ 0
CTSB-202ENST00000353047 ZNF497Q6ZNH5 498 aa15.08■□□□□ 0
CTSB-202ENST00000353047 ZCCHC24Q8N2G6 241 aaKnown RBP15.08■□□□□ 0
CTSB-202ENST00000353047 B4E171 279 aa15.08■□□□□ 0
CTSB-202ENST00000353047 PDE6DO43924 150 aa15.08■□□□□ 0
CTSB-202ENST00000353047 RPLP1P05386 114 aaKnown RBP15.08■□□□□ 0
CTSB-202ENST00000353047 LMO1P25800 156 aa15.08■□□□□ 0
CTSB-202ENST00000353047 TIMP3P35625 211 aa15.08■□□□□ 0
CTSB-202ENST00000353047 TSPAN7P41732 249 aa15.08■□□□□ 0
CTSB-202ENST00000353047 GFRA1P56159 465 aa15.08■□□□□ 0
CTSB-202ENST00000353047 SELENOVP59797 346 aa15.08■□□□□ 0
CTSB-202ENST00000353047 MIR17HGQ75NE6 70 aa15.08■□□□□ 0
CTSB-202ENST00000353047 OR2D3Q8NGH3 330 aa15.08■□□□□ 0
CTSB-202ENST00000353047 OR5B3Q8NH48 314 aa15.08■□□□□ 0
CTSB-202ENST00000353047 RAB4AP20338 218 aa15.07■□□□□ 0
CTSB-202ENST00000353047 ZNF295-AS1Q8N0V1 137 aa15.07■□□□□ 0
CTSB-202ENST00000353047 STPG3Q8N7X2 389 aa15.07■□□□□ 0
CTSB-202ENST00000353047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.07■□□□□ 01e-6■■■■□ 21.7
CTSB-202ENST00000353047 SMPD2O60906 423 aa15.07■□□□□ 0
CTSB-202ENST00000353047 MFAP2P55001 183 aa15.07■□□□□ 0
CTSB-202ENST00000353047 ETFRF1Q6IPR1 90 aa15.07■□□□□ 0
CTSB-202ENST00000353047 RND2P52198 227 aa15.07■□□□□ 0
CTSB-202ENST00000353047 RANP62826 216 aaKnown RBP15.07■□□□□ 0
CTSB-202ENST00000353047 TCF19Q9Y242 345 aa15.07■□□□□ 0
CTSB-202ENST00000353047 TANC2Q9HCD6 1990 aa15.06■□□□□ 0
CTSB-202ENST00000353047 REG1AP05451 166 aa15.06■□□□□ 0
CTSB-202ENST00000353047 NPPCP23582 126 aa15.06■□□□□ 0
CTSB-202ENST00000353047 FOXA3P55318 350 aaPredicted RBP15.06■□□□□ 0
CTSB-202ENST00000353047 UBE2L3P68036 154 aaKnown RBP15.06■□□□□ 0
CTSB-202ENST00000353047 MRPS11P82912 194 aaKnown RBP15.06■□□□□ 0
CTSB-202ENST00000353047 ZFP36L1Q07352 338 aaKnown RBP15.06■□□□□ 0
CTSB-202ENST00000353047 Q6P435 159 aa15.06■□□□□ 0
CTSB-202ENST00000353047 Q6ZVH6 145 aa15.06■□□□□ 0
CTSB-202ENST00000353047 ZGRF1Q86YA3 2104 aa15.06■□□□□ 0
CTSB-202ENST00000353047 DKK1O94907 266 aa15.06■□□□□ 0
CTSB-202ENST00000353047 FOXF2Q12947 444 aa15.06■□□□□ 0
CTSB-202ENST00000353047 CENPWQ5EE01 88 aa15.06■□□□□ 0
CTSB-202ENST00000353047 LCN12Q6JVE5 192 aa15.06■□□□□ 0
CTSB-202ENST00000353047 TEPPQ6URK8 271 aa15.06■□□□□ 0
CTSB-202ENST00000353047 SAXO1Q8IYX7 474 aa15.06■□□□□ 0
CTSB-202ENST00000353047 SPSB4Q96A44 273 aa15.06■□□□□ 0
CTSB-202ENST00000353047 COMMD5Q9GZQ3 224 aa15.06■□□□□ 0
CTSB-202ENST00000353047 SIAH2O43255 324 aa15.06■□□□□ 0
CTSB-202ENST00000353047 MMDQ15546 238 aa15.06■□□□□ 0
CTSB-202ENST00000353047 VAMP3Q15836 100 aa15.06■□□□□ 0
CTSB-202ENST00000353047 FER1L6-AS2Q96M78 137 aa15.06■□□□□ 0
CTSB-202ENST00000353047 NKX2-8O15522 239 aa15.05■□□□□ 0
CTSB-202ENST00000353047 CXorf1O96002 111 aa15.05■□□□□ 0
CTSB-202ENST00000353047 STUMQ69YW2 141 aa15.05■□□□□ 0
CTSB-202ENST00000353047 TMEM14EPQ6UXP3 125 aa15.05■□□□□ 0
CTSB-202ENST00000353047 SLC24A4Q8NFF2 622 aa15.05■□□□□ 0
CTSB-202ENST00000353047 SSBP4Q9BWG4 385 aaPredicted RBP15.05■□□□□ 0
CTSB-202ENST00000353047 SH2D2AQ9NP31 389 aa15.05■□□□□ 0
CTSB-202ENST00000353047 ZNF835Q9Y2P0 537 aa15.05■□□□□ 0
CTSB-202ENST00000353047 TRAV1-1A0A0B4J248 108 aa15.05■□□□□ -0
CTSB-202ENST00000353047 SRP14P37108 136 aaKnown RBP15.05■□□□□ -0
CTSB-202ENST00000353047 OPRK1P41145 380 aa15.05■□□□□ -0
CTSB-202ENST00000353047 POLR3KQ9Y2Y1 108 aaPredicted RBP15.05■□□□□ -0
CTSB-202ENST00000353047 TMPRSS2O15393 492 aa15.05■□□□□ -0
CTSB-202ENST00000353047 PTTG1IPP53801 180 aa15.05■□□□□ -0
CTSB-202ENST00000353047 CCL8P80075 99 aa15.05■□□□□ -0
CTSB-202ENST00000353047 SPATA45Q537H7 98 aa15.05■□□□□ -0
CTSB-202ENST00000353047 TMEM178AQ8NBL3 297 aa15.05■□□□□ -0
CTSB-202ENST00000353047 LINC00479Q96M42 142 aa15.05■□□□□ -0
CTSB-202ENST00000353047 USF1P22415 310 aaPredicted RBP15.04■□□□□ -0
CTSB-202ENST00000353047 GBGT1Q8N5D6 347 aa15.04■□□□□ -0
CTSB-202ENST00000353047 CCL13Q99616 98 aa15.04■□□□□ -0
CTSB-202ENST00000353047 PKIBQ9C010 78 aa15.04■□□□□ -0
CTSB-202ENST00000353047 TBL2Q9Y4P3 447 aaKnown RBP15.04■□□□□ -0
CTSB-202ENST00000353047 J3QR06 171 aa15.04■□□□□ -0
CTSB-202ENST00000353047 IL6RP08887 468 aaPredicted RBP15.04■□□□□ -0
CTSB-202ENST00000353047 GCHFRP30047 84 aa15.04■□□□□ -0
CTSB-202ENST00000353047 NUTF2P61970 127 aaKnown RBP15.04■□□□□ -0
CTSB-202ENST00000353047 KRTCAP3Q53RY4 240 aa15.04■□□□□ -0
CTSB-202ENST00000353047 OR5R1Q8NH85 324 aa15.04■□□□□ -0
CTSB-202ENST00000353047 ZCCHC14Q8WYQ9 949 aaKnown RBP15.04■□□□□ -0
CTSB-202ENST00000353047 HSPB7Q9UBY9 170 aa15.04■□□□□ -0
CTSB-202ENST00000353047 CA2P00918 260 aa15.04■□□□□ -0
CTSB-202ENST00000353047 TRA2AQ13595 282 aaKnown RBP eCLIP15.04■□□□□ -0
CTSB-202ENST00000353047 NPVFQ9HCQ7 196 aa15.04■□□□□ -0
CTSB-202ENST00000353047 ZNF355PQ9NSJ1 428 aa15.04■□□□□ -0
CTSB-202ENST00000353047 NAV3Q8IVL0 2385 aa15.04■□□□□ -0
CTSB-202ENST00000353047 WISP2O76076 250 aa15.03■□□□□ -0
CTSB-202ENST00000353047 UBE2G1P62253 170 aa15.03■□□□□ -0
CTSB-202ENST00000353047 SRSF6Q13247 344 aaKnown RBP15.03■□□□□ -0
CTSB-202ENST00000353047 DAZAP2Q15038 168 aaPredicted RBP15.03■□□□□ -0
CTSB-202ENST00000353047 OR2V2Q96R30 315 aa15.03■□□□□ -0
CTSB-202ENST00000353047 CXXC4Q9H2H0 198 aa15.03■□□□□ -0
CTSB-202ENST00000353047 MALRD1Q5VYJ5 2156 aa15.03■□□□□ -0
CTSB-202ENST00000353047 LOC400499M0QZD8 3231 aa15.03■□□□□ -0
CTSB-202ENST00000353047 IGHV1-2P23083 117 aa15.03■□□□□ -0
CTSB-202ENST00000353047 MCRIP2Q9BUT9 160 aaKnown RBP15.03■□□□□ -0
CTSB-202ENST00000353047 WIPI2Q9Y4P8 454 aa15.03■□□□□ -0
CTSB-202ENST00000353047 NPSP0C0P6 89 aa15.03■□□□□ -0
CTSB-202ENST00000353047 ARSJQ5FYB0 599 aaPredicted RBP15.03■□□□□ -0
CTSB-202ENST00000353047 MRPL37Q9BZE1 423 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms