RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 WDYHV1Q96HA8 205 aa14.43□□□□□ -0.1
TRAPPC11-201ENST00000334690 LDLRAD4O15165 306 aa14.43□□□□□ -0.1
TRAPPC11-201ENST00000334690 IL6RP08887 468 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC11-201ENST00000334690 DDTP30046 118 aa14.43□□□□□ -0.1
TRAPPC11-201ENST00000334690 TMPRSS3P57727 454 aa14.43□□□□□ -0.1
TRAPPC11-201ENST00000334690 ZFP30Q9Y2G7 519 aa14.43□□□□□ -0.1
TRAPPC11-201ENST00000334690 DMRT1Q9Y5R6 373 aa14.43□□□□□ -0.1
TRAPPC11-201ENST00000334690 AMY1AP04745 511 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 ID3Q02535 119 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 FAM166AQ6J272 317 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 RBPMS2Q6ZRY4 209 aaKnown RBP14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 LHFPL1Q86WI0 220 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 GBF1Q92538 1859 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 FXYD3Q14802 87 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 FOXD3Q9UJU5 478 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 IGKV1D-13A0A0B4J2D9 117 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 KBTBD11-OT1A0A1B0GTJ5 212 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 IGKV1-13P0DP09 117 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 EGR1P18146 543 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 A0A0A6YYD4 124 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 LEPROTL1O95214 131 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 ARF6P62330 175 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 ZIC4Q8N9L1 334 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 ZCCHC14Q8WYQ9 949 aaKnown RBP14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 MESP1Q9BRJ9 268 aa14.42□□□□□ -0.1
TRAPPC11-201ENST00000334690 PRR19A6NJB7 356 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 J3KRW8 73 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 RRHO14718 337 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 FCGR2BP31994 310 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 GPX4P36969 197 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 ID1P41134 155 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 RELBQ01201 579 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 DEPPQ9NTK1 212 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 IGKV3D-15A0A087WSY6 115 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 NTN3O00634 580 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 SRIP30626 198 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 CENPWQ5EE01 88 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 COL25A1Q9BXS0 654 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 DOPEY2Q9Y3R5 2298 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 CLDND2Q8NHS1 167 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 IFI27L2Q9H2X8 130 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 C9orf172C9J069 976 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 RAB9AP51151 201 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 LOXL3P58215 753 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 MEF2CQ06413 473 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 CLEC2AQ6UVW9 174 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 UNQ5815/PRO19632Q6UWF5 114 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 TMEM183AQ8IXX5 376 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 MUC15Q8N387 334 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 PLPPR1Q8TBJ4 325 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 METTL26Q96S19 204 aa14.41□□□□□ -0.1
TRAPPC11-201ENST00000334690 RPS20P60866 119 aaKnown RBP14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 OR4A47Q6IF82 309 aa14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 A0A1W2PS18 150 aa14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 ACSF3Q4G176 576 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 CKS2P33552 79 aa14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 FAM27E3Q08E93 113 aa14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 CACNG8Q8WXS5 425 aa14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 TMEM106BQ9NUM4 274 aa14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 UQCR10Q9UDW1 63 aa14.4□□□□□ -0.1
TRAPPC11-201ENST00000334690 ABCA1O95477 2261 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 MAS1LP35410 378 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 WDR81Q562E7 1941 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 IGKV1D-8A0A087WSZ0 117 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 TWIST1Q15672 202 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 MGPP08493 103 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 APOBEC3AP31941 199 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 FAM209BQ5JX69 171 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 SDF2L1Q9HCN8 221 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 PI4KAP42356 2102 aa14.39□□□□□ -0.11
TRAPPC11-201ENST00000334690 REG1AP05451 166 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 KIAA1644Q3SXP7 199 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 NABP1Q96AH0 204 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 NPIPB11E5RHQ5 1161 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 CELA3BP08861 270 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 PSG9Q00887 426 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 FAM216BQ8N7L0 139 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 SRSF12Q8WXF0 261 aaKnown RBP14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 GUCD1Q96NT3 240 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 SEMA5BQ9P283 1151 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 TRBV23-1A0A0A0MS06 115 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 TRAV24A0A0B4J272 114 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 YPEL1O60688 119 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 SS18L1O75177 396 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 TFF3Q07654 80 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 ZNF497Q6ZNH5 498 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 PGLYRP4Q96LB8 373 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 YPEL2Q96QA6 119 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 DCTN5Q9BTE1 182 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 PLXNA3P51805 1871 aa14.38□□□□□ -0.11
TRAPPC11-201ENST00000334690 LOC105371242A0A075B767 164 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 OR10J6PQ8NGY7 276 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 C16orf92Q96LL3 132 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 CREBBPQ92793 2442 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 IGKV1-12A0A0C4DH73 117 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 LOC389332A0A1B0GUA5 103 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 IGKV1D-12P01611 117 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 CLPSP04118 112 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 SRSF9Q13242 221 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 SRSF7Q16629 238 aaKnown RBP eCLIP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms