RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 PrkacaP05132 351 aaKnown RBP12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 FblP35550 327 aaKnown RBP12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Clec12bQ149M0 275 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cfhr1Q61406 343 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tox3Q80W03 575 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Osbpl11Q8CI95 751 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr281Q8VET6 311 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Rbm39Q8VH51 530 aaKnown RBP12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Suv39h2Q9EQQ0 477 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Klk1b27Q9JM71 263 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Chst5Q9QUP4 395 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cml5Q9QXS8 227 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr175-ps1A0A140T8K4 308 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tmsb15aA2AEH9 79 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm7233E9PZI8 198 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm9732F6QVC4 198 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm5849J3QPE5 117 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm8104K7N744 198 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 FauP35545 74 aaKnown RBP12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Prop1P97458 223 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm21943Q5FWD5 227 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Zic3Q62521 466 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Smim12Q78RX3 92 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tmprss11fQ8BHM9 439 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Slc25a41Q8BVN7 312 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr720Q8VF37 316 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cst14Q8VII3 130 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 GmfbQ9CQI3 142 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ctrb1Q9CR35 263 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Irak1bp1Q9ESJ7 259 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Crim1Q9JLL0 1037 aa12.46□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tcrg-V5A0A0G2JGV5 113 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr102B2RT33 308 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm15440D3Z3P4 90 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Vmn2r83E9Q0G7 864 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Pax2P32114 414 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Rab18P35293 206 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 AesP63002 197 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Znf260Q62513 407 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr1211Q7TR09 311 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr101Q920Z0 308 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Teddm3Q9CQH1 294 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Naa60Q9DBU2 242 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Wrap73Q9JM98 462 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 SdcbpO08992 299 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Znf691Q3TDE8 283 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr180Q7TS48 317 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 PirtQ8BFY0 135 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 FarsaQ8C0C7 508 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Klf17Q8CFA7 341 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr1259Q8VEZ1 309 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr1350Q8VF34 308 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr1280Q8VGG8 305 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Ms4a8Q99N10 290 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Mansc1Q9CR33 414 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Sun5Q9DA32 373 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Bcl2l10Q9Z0F3 191 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Rgs11Q9Z2H1 443 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Pkd1l2Q7TN88 2461 aa12.45□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm21497A0A087WRK3 222 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm29049A0A087WSM5 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm11756A2BEJ1 356 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Zcchc24B2RVL6 241 aaKnown RBP12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 4933408B17RikG3X9B4 273 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm6594J3QM43 95 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm21118J3QPK8 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Kcnk3O35111 409 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Ifna7P06799 190 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Rab3dP35276 219 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Nr2c2apQ3TV70 140 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm20909Q5FWB5 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm20852Q5M8R5 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm20917Q62457 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm20809Q62458 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm20865Q62460 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm20738Q810R8 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Mrpl48Q8JZS9 211 aaKnown RBP12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Wipf1Q8K1I7 493 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Rbms1Q91W59 403 aaKnown RBP12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Mrps36Q9CQX8 102 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Gm20806Q9D9T3 227 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr587-ps1A0A1B0GSS1 159 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 4931422A03RikA2BHN9 113 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Atf6bO35451 699 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Cxcl1P12850 96 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Fgf2P15655 154 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Efnb2P52800 336 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Rbp2Q08652 134 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 SelenohQ3UQA7 116 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Dtx1Q61010 627 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Dlx1Q64317 255 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Acsm5Q8BGA8 578 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Dcun1d4Q8CCA0 292 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Vmn1r36Q8R2E3 305 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Wdr4Q9EP82 413 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 TncQ80YX1 2110 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Ep300B2RWS6 2412 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 NbasE9Q411 2356 aa12.44□□□□□ -0.42
Nup88-202ENSMUST00000108530 Iglv3A0A0B4J1K5 122 aa12.43□□□□□ -0.42
Nup88-202ENSMUST00000108530 Pm20d2A3KG59 431 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms