Protein–RNA interactions for Protein: Q8VH51

Rbm39, RNA-binding protein 39, mousemouse

Known RBP Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm39Q8VH51 Gm25239-201ENSMUST00000174915 86 ntBASIC29.94■■■□□ 2.38
Rbm39Q8VH51 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Rbm39Q8VH51 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rbm39Q8VH51 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Rbm39Q8VH51 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Rbm39Q8VH51 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rbm39Q8VH51 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rbm39Q8VH51 Psd-208ENSMUST00000224556 2034 ntBASIC27.11■■□□□ 1.93
Rbm39Q8VH51 Gm15042-201ENSMUST00000120212 883 ntBASIC26.82■■□□□ 1.88
Rbm39Q8VH51 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rbm39Q8VH51 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rbm39Q8VH51 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rbm39Q8VH51 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rbm39Q8VH51 Gm15045-201ENSMUST00000117359 883 ntBASIC26.27■■□□□ 1.8
Rbm39Q8VH51 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.14■■□□□ 1.77
Rbm39Q8VH51 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rbm39Q8VH51 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Rbm39Q8VH51 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rbm39Q8VH51 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rbm39Q8VH51 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rbm39Q8VH51 Gm24109-201ENSMUST00000175489 103 ntBASIC25.61■■□□□ 1.69
Rbm39Q8VH51 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rbm39Q8VH51 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rbm39Q8VH51 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rbm39Q8VH51 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rbm39Q8VH51 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rbm39Q8VH51 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rbm39Q8VH51 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.4■■□□□ 1.66
Rbm39Q8VH51 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rbm39Q8VH51 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rbm39Q8VH51 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.24■■□□□ 1.63
Rbm39Q8VH51 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rbm39Q8VH51 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rbm39Q8VH51 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Rbm39Q8VH51 Gm23366-201ENSMUST00000175022 89 ntBASIC25.16■■□□□ 1.62
Rbm39Q8VH51 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rbm39Q8VH51 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rbm39Q8VH51 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rbm39Q8VH51 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rbm39Q8VH51 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rbm39Q8VH51 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rbm39Q8VH51 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rbm39Q8VH51 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.84■■□□□ 1.57
Rbm39Q8VH51 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.74■■□□□ 1.55
Rbm39Q8VH51 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.72■■□□□ 1.55
Rbm39Q8VH51 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rbm39Q8VH51 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Rbm39Q8VH51 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.62■■□□□ 1.53
Rbm39Q8VH51 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rbm39Q8VH51 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rbm39Q8VH51 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rbm39Q8VH51 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rbm39Q8VH51 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.41■■□□□ 1.5
Rbm39Q8VH51 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rbm39Q8VH51 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.34■■□□□ 1.49
Rbm39Q8VH51 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rbm39Q8VH51 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rbm39Q8VH51 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rbm39Q8VH51 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rbm39Q8VH51 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rbm39Q8VH51 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rbm39Q8VH51 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.1■■□□□ 1.45
Rbm39Q8VH51 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rbm39Q8VH51 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rbm39Q8VH51 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Rbm39Q8VH51 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Rbm39Q8VH51 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Rbm39Q8VH51 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rbm39Q8VH51 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rbm39Q8VH51 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rbm39Q8VH51 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Rbm39Q8VH51 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Rbm39Q8VH51 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rbm39Q8VH51 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rbm39Q8VH51 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rbm39Q8VH51 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.71■■□□□ 1.39
Rbm39Q8VH51 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rbm39Q8VH51 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rbm39Q8VH51 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rbm39Q8VH51 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Rbm39Q8VH51 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rbm39Q8VH51 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rbm39Q8VH51 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
Rbm39Q8VH51 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.63■■□□□ 1.37
Rbm39Q8VH51 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rbm39Q8VH51 Gm27325-201ENSMUST00000175467 74 ntBASIC23.6■■□□□ 1.37
Rbm39Q8VH51 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rbm39Q8VH51 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rbm39Q8VH51 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rbm39Q8VH51 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Rbm39Q8VH51 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.43■■□□□ 1.34
Rbm39Q8VH51 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
Rbm39Q8VH51 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Rbm39Q8VH51 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rbm39Q8VH51 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm39Q8VH51 Gm25238-201ENSMUST00000174914 89 ntBASIC23.4■■□□□ 1.34
Rbm39Q8VH51 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm39Q8VH51 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm39Q8VH51 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm39Q8VH51 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms