RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Syt6Q9R0N8 511 aa12.15□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Cldn15Q9Z0S5 227 aa12.15□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Trav7n-5A0A075B604 112 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Vmn1r224E9PWK2 298 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Rnase2O35291 155 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 LplP11152 474 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Arpc4P59999 168 aaKnown RBP12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Rab3cP62823 227 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Rpl31P62900 125 aaKnown RBP12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gcm1P70348 436 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gm21943Q5FWD5 227 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 FshbQ60687 130 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr1474Q7TQQ8 314 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr259Q7TS20 312 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Sec22aQ8BH47 307 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Zfp799Q8BHK4 648 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Hif1anQ8BLR9 349 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Tssk5Q8C1R0 372 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Nedd4lQ8CFI0 1004 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr1384Q8VFA8 318 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Exosc4Q921I9 245 aaKnown RBP12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Il36bQ9D6Z6 183 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Irak1bp1Q9ESJ7 259 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Cx3cr1Q9Z0D9 354 aa12.14□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Myo9aQ8C170 2542 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Cmya5Q70KF4 3739 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Nav2E9Q842 2432 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gm44596A0A0N4SVA0 210 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gm14597A2CFG5 200 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Vmn2r108E9PYS0 855 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gm9972E9Q053 102 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gm2381G3UY53 305 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Mex3aG3UYU0 520 aaKnown RBP12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gm21818J3KMS6 170 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 E030018B13RikJ3QMS9 113 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Btbd35f6J3QMW9 498 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 P01726 129 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 H1f0P10922 194 aaKnown RBP12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Stfa3P35173 103 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Cav3P51637 151 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Zfp7Q3TFZ4 685 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Mfsd4b3Q3UN21 355 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Ctxn2Q3URE8 81 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Slc38a11Q3USY0 453 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Samd5Q3V1H9 173 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 SlaQ60898 281 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Sec24bQ80ZX0 1251 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 TMEM229BQ8BFQ2 167 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Arl6ip6Q8BH07 226 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 E130116L18RikQ8BMV6 101 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Fn3krpQ8K274 309 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Commd1Q8K4M5 188 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Vmn1r178Q8R2B6 304 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Ms4a3Q920C4 213 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 SdhdQ9CXV1 159 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Tmbim7Q9D592 302 aa12.13□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Hivep2Q3UHF7 2430 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Trbv26A0A0B4J1P5 115 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Zfp961E9Q4R5 444 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gm21972J3QN38 98 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Map2k4P47809 397 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 PjvkQ0ZLH2 352 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Prok1Q14A28 105 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Fam219bQ14DQ1 197 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Zdhhc23Q5Y5T3 425 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Galnt14Q8BVG5 550 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Stfa2l1Q8BWM3 103 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Actrt3Q8BXF8 369 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr1241Q8VF91 314 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr279Q8VFD8 310 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr1170Q8VFG1 316 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr410Q8VFX7 315 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Pard6gQ9JK84 382 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Psma1Q9R1P4 263 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 TncQ80YX1 2110 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Csmd1Q923L3 3564 aa12.12□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Prss47A0A0N4SVQ0 395 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Vmn1r124D3YTX4 307 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Aldh3b2E9Q3E1 479 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Aldh3b3J3QMK6 479 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gosr1O88630 250 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Ifna7P06799 190 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Tacr3P47937 452 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Cxcl5P50228 132 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gnb2P62880 340 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Dlx6P70397 175 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Cfc1P97766 202 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 ArsgQ3TYD4 525 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gpr160Q3U3F9 336 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Diras2Q5PR73 199 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Gnb3Q61011 340 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr1126Q7TR49 314 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Olfr222Q7TS30 318 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Prickle3Q80VL3 624 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Cmtm4Q8CJ61 208 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Uxs1Q91XL3 420 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Trappc2Q9CQP2 140 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Ndufb7Q9CR61 137 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Ssbp3Q9D032 388 aa12.11□□□□□ -0.47
Ercc1-201ENSMUST00000003645 Prr30Q9D9B7 401 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 121.8 ms