Protein–RNA interactions for Protein: Q8CJ61

Cmtm4, CKLF-like MARVEL transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtm4Q8CJ61 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Cmtm4Q8CJ61 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Cmtm4Q8CJ61 Gm25239-201ENSMUST00000174915 86 ntBASIC28.68■■■□□ 2.18
Cmtm4Q8CJ61 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cmtm4Q8CJ61 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cmtm4Q8CJ61 Psd-208ENSMUST00000224556 2034 ntBASIC28.19■■■□□ 2.1
Cmtm4Q8CJ61 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Cmtm4Q8CJ61 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cmtm4Q8CJ61 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cmtm4Q8CJ61 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cmtm4Q8CJ61 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cmtm4Q8CJ61 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cmtm4Q8CJ61 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cmtm4Q8CJ61 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cmtm4Q8CJ61 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cmtm4Q8CJ61 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cmtm4Q8CJ61 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Cmtm4Q8CJ61 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Cmtm4Q8CJ61 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Cmtm4Q8CJ61 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cmtm4Q8CJ61 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.94■■□□□ 1.74
Cmtm4Q8CJ61 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cmtm4Q8CJ61 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cmtm4Q8CJ61 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cmtm4Q8CJ61 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cmtm4Q8CJ61 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cmtm4Q8CJ61 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cmtm4Q8CJ61 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.54■■□□□ 1.68
Cmtm4Q8CJ61 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cmtm4Q8CJ61 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cmtm4Q8CJ61 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.48■■□□□ 1.67
Cmtm4Q8CJ61 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.48■■□□□ 1.67
Cmtm4Q8CJ61 Gm15042-201ENSMUST00000120212 883 ntBASIC25.45■■□□□ 1.66
Cmtm4Q8CJ61 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
Cmtm4Q8CJ61 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cmtm4Q8CJ61 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cmtm4Q8CJ61 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cmtm4Q8CJ61 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.12■■□□□ 1.61
Cmtm4Q8CJ61 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cmtm4Q8CJ61 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cmtm4Q8CJ61 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.05■■□□□ 1.6
Cmtm4Q8CJ61 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cmtm4Q8CJ61 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.01■■□□□ 1.59
Cmtm4Q8CJ61 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Cmtm4Q8CJ61 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Cmtm4Q8CJ61 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cmtm4Q8CJ61 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cmtm4Q8CJ61 Gm15045-201ENSMUST00000117359 883 ntBASIC24.86■■□□□ 1.57
Cmtm4Q8CJ61 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cmtm4Q8CJ61 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cmtm4Q8CJ61 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cmtm4Q8CJ61 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cmtm4Q8CJ61 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cmtm4Q8CJ61 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.62■■□□□ 1.53
Cmtm4Q8CJ61 Gm24109-201ENSMUST00000175489 103 ntBASIC24.61■■□□□ 1.53
Cmtm4Q8CJ61 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cmtm4Q8CJ61 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Cmtm4Q8CJ61 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Cmtm4Q8CJ61 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Cmtm4Q8CJ61 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cmtm4Q8CJ61 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cmtm4Q8CJ61 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cmtm4Q8CJ61 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cmtm4Q8CJ61 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cmtm4Q8CJ61 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cmtm4Q8CJ61 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cmtm4Q8CJ61 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cmtm4Q8CJ61 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cmtm4Q8CJ61 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Cmtm4Q8CJ61 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cmtm4Q8CJ61 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.19■■□□□ 1.46
Cmtm4Q8CJ61 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cmtm4Q8CJ61 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cmtm4Q8CJ61 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cmtm4Q8CJ61 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cmtm4Q8CJ61 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Cmtm4Q8CJ61 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.09■■□□□ 1.45
Cmtm4Q8CJ61 Gm23366-201ENSMUST00000175022 89 ntBASIC24.07■■□□□ 1.44
Cmtm4Q8CJ61 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Cmtm4Q8CJ61 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cmtm4Q8CJ61 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.98■■□□□ 1.43
Cmtm4Q8CJ61 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cmtm4Q8CJ61 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Cmtm4Q8CJ61 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cmtm4Q8CJ61 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cmtm4Q8CJ61 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cmtm4Q8CJ61 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.88■■□□□ 1.41
Cmtm4Q8CJ61 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cmtm4Q8CJ61 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cmtm4Q8CJ61 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cmtm4Q8CJ61 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cmtm4Q8CJ61 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cmtm4Q8CJ61 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cmtm4Q8CJ61 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cmtm4Q8CJ61 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cmtm4Q8CJ61 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cmtm4Q8CJ61 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cmtm4Q8CJ61 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cmtm4Q8CJ61 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Cmtm4Q8CJ61 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms