Protein–RNA interactions for Protein: Q8K4M5

Commd1, COMM domain-containing protein 1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd1Q8K4M5 Gm25239-201ENSMUST00000174915 86 ntBASIC32.07■■■□□ 2.72
Commd1Q8K4M5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Commd1Q8K4M5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Commd1Q8K4M5 Gm15042-201ENSMUST00000120212 883 ntBASIC28.02■■■□□ 2.08
Commd1Q8K4M5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Commd1Q8K4M5 Gm24109-201ENSMUST00000175489 103 ntBASIC27.77■■■□□ 2.04
Commd1Q8K4M5 Gm15045-201ENSMUST00000117359 883 ntBASIC27.3■■□□□ 1.96
Commd1Q8K4M5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Commd1Q8K4M5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Commd1Q8K4M5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Commd1Q8K4M5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Commd1Q8K4M5 Gm23366-201ENSMUST00000175022 89 ntBASIC26.86■■□□□ 1.89
Commd1Q8K4M5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Commd1Q8K4M5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Commd1Q8K4M5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Commd1Q8K4M5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Commd1Q8K4M5 Psd-208ENSMUST00000224556 2034 ntBASIC26.41■■□□□ 1.82
Commd1Q8K4M5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Commd1Q8K4M5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.92■■□□□ 1.74
Commd1Q8K4M5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Commd1Q8K4M5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Commd1Q8K4M5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Commd1Q8K4M5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
Commd1Q8K4M5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.7■■□□□ 1.7
Commd1Q8K4M5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.68■■□□□ 1.7
Commd1Q8K4M5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Commd1Q8K4M5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Commd1Q8K4M5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Commd1Q8K4M5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Commd1Q8K4M5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.43■■□□□ 1.66
Commd1Q8K4M5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Commd1Q8K4M5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Commd1Q8K4M5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Commd1Q8K4M5 Gm25238-201ENSMUST00000174914 89 ntBASIC25.28■■□□□ 1.64
Commd1Q8K4M5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Commd1Q8K4M5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Commd1Q8K4M5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.17■■□□□ 1.62
Commd1Q8K4M5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Commd1Q8K4M5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Commd1Q8K4M5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Commd1Q8K4M5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Commd1Q8K4M5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Commd1Q8K4M5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Commd1Q8K4M5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
Commd1Q8K4M5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Commd1Q8K4M5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Commd1Q8K4M5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Commd1Q8K4M5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Commd1Q8K4M5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.73■■□□□ 1.55
Commd1Q8K4M5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.72■■□□□ 1.55
Commd1Q8K4M5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Commd1Q8K4M5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Commd1Q8K4M5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.64■■□□□ 1.54
Commd1Q8K4M5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Commd1Q8K4M5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Commd1Q8K4M5 Gm27325-201ENSMUST00000175467 74 ntBASIC24.52■■□□□ 1.52
Commd1Q8K4M5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Commd1Q8K4M5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.48■■□□□ 1.51
Commd1Q8K4M5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Commd1Q8K4M5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Commd1Q8K4M5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Commd1Q8K4M5 Gm25262-201ENSMUST00000174934 133 ntBASIC24.37■■□□□ 1.49
Commd1Q8K4M5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.33■■□□□ 1.48
Commd1Q8K4M5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Commd1Q8K4M5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Commd1Q8K4M5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
Commd1Q8K4M5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Commd1Q8K4M5 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.2■■□□□ 1.46
Commd1Q8K4M5 Rab21-202ENSMUST00000218831 843 ntBASIC24.16■■□□□ 1.46
Commd1Q8K4M5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.15■■□□□ 1.46
Commd1Q8K4M5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Commd1Q8K4M5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.1■■□□□ 1.45
Commd1Q8K4M5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.03■■□□□ 1.44
Commd1Q8K4M5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.01■■□□□ 1.43
Commd1Q8K4M5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.98■■□□□ 1.43
Commd1Q8K4M5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Commd1Q8K4M5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Commd1Q8K4M5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Commd1Q8K4M5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Commd1Q8K4M5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Commd1Q8K4M5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.89■■□□□ 1.41
Commd1Q8K4M5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Commd1Q8K4M5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
Commd1Q8K4M5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Commd1Q8K4M5 Gm26115-201ENSMUST00000175605 87 ntBASIC23.79■■□□□ 1.4
Commd1Q8K4M5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.78■■□□□ 1.4
Commd1Q8K4M5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Commd1Q8K4M5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Commd1Q8K4M5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Commd1Q8K4M5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Commd1Q8K4M5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Commd1Q8K4M5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Commd1Q8K4M5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Commd1Q8K4M5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Commd1Q8K4M5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Commd1Q8K4M5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Commd1Q8K4M5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Commd1Q8K4M5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.65■■□□□ 1.38
Commd1Q8K4M5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Commd1Q8K4M5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms