RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 DIDO1Q9BTC0 2240 aaKnown RBP12.24□□□□□ -0.45
CHTOP-206ENST00000495554 M0R1X1 148 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 IFNA1P01562 189 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 RAB11AP62491 216 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 VWC2Q2TAL6 325 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 UNQ6494/PRO21346Q6UXR6 183 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 FAM222BQ8WU58 562 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 YPEL4Q96NS1 127 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 CALYQ9NYX4 217 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 VAX2Q9UIW0 290 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 PCNX1Q96RV3 2341 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 CXorf65A6NEN9 183 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 K7ENP7 123 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 FGF7P21781 194 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 ZNF134P52741 427 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 FAM90A2PQ658T7 463 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 ADAM5Q6NVV9 412 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 LHX4Q969G2 390 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 QTRT1Q9BXR0 403 aaKnown RBP12.24□□□□□ -0.45
CHTOP-206ENST00000495554 IFI27L2Q9H2X8 130 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 RNF7Q9UBF6 113 aa12.24□□□□□ -0.45
CHTOP-206ENST00000495554 A0A1W2PPQ1 181 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 B4DEV8 164 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 NPSP0C0P6 89 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 CGB3P0DN86 165 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 CGB7P0DN87 165 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 GCM1Q9NP62 436 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 PTPRQQ9UMZ3 2332 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 A0A087X0M5 115 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 A0A1B0GX30 115 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 PRRG2O14669 202 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 IFNA17P01571 189 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 IGKV1D-33P01593 117 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 IGKV1-33P01594 117 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 OR9G9P0C7N8 305 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 CD40P25942 277 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 RAB7AP51149 207 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 TNFAIP6P98066 277 aaPredicted RBP12.23□□□□□ -0.45
CHTOP-206ENST00000495554 PNRC1Q12796 327 aaPredicted RBP12.23□□□□□ -0.45
CHTOP-206ENST00000495554 ACSM6Q6P461 480 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 SDSLQ96GA7 329 aa12.23□□□□□ -0.45
CHTOP-206ENST00000495554 KIR2DS2P43631 304 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 PRRX1P54821 245 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 ERVK-16P61578 105 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 USF2Q15853 346 aaPredicted RBP12.22□□□□□ -0.45
CHTOP-206ENST00000495554 RPL39P5Q59GN2 51 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 SPINK9Q5DT21 86 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 PRAMEF5Q5TYX0 476 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 ZNF709Q8N972 641 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 S1PR3Q99500 378 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 NPCDR1Q9BY65 106 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 GFOD1Q9NXC2 390 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 ZNF835Q9Y2P0 537 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 ZNF727A8MUV8 499 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 IGHV1-46P01743 117 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 TNFSF4P23510 183 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 HNF4GQ14541 408 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 C17orf58Q2M2W7 97 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 FAM201AQ5SY85 155 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 C1QL4Q86Z23 238 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 OR52E5Q8NH55 327 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 SNRNP40Q96DI7 357 aaKnown RBP12.22□□□□□ -0.45
CHTOP-206ENST00000495554 PRDM13Q9H4Q3 707 aa12.22□□□□□ -0.45
CHTOP-206ENST00000495554 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
CHTOP-206ENST00000495554 SMG1Q96Q15 3661 aaKnown RBP12.21□□□□□ -0.45
CHTOP-206ENST00000495554 KBTBD11-OT1A0A1B0GTJ5 212 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 CTXND1A0A1B0GTU2 59 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 C15orf62A8K5M9 175 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 IGHV3-7P01780 117 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 NQO2P16083 231 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 MDKP21741 143 aaPredicted RBP12.21□□□□□ -0.45
CHTOP-206ENST00000495554 OR2B8PP59922 312 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 PRR30Q53SZ7 412 aaPredicted RBP12.21□□□□□ -0.45
CHTOP-206ENST00000495554 NUP37Q8NFH4 326 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 OR10G9Q8NGN4 311 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 OR10G7Q8NGN6 311 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 TMEM208Q9BTX3 173 aa12.21□□□□□ -0.45
CHTOP-206ENST00000495554 TRGV10A0A0A0MS01 117 aa12.21□□□□□ -0.46
CHTOP-206ENST00000495554 C17orf112F2Z3M2 114 aa12.21□□□□□ -0.46
CHTOP-206ENST00000495554 FFAR4Q5NUL3 377 aa12.21□□□□□ -0.46
CHTOP-206ENST00000495554 STUMQ69YW2 141 aa12.21□□□□□ -0.46
CHTOP-206ENST00000495554 GFRALQ6UXV0 394 aa12.21□□□□□ -0.46
CHTOP-206ENST00000495554 ATG101Q9BSB4 218 aa12.21□□□□□ -0.46
CHTOP-206ENST00000495554 FAM234AQ9H0X4 552 aa12.21□□□□□ -0.46
CHTOP-206ENST00000495554 RPS16P62249 146 aaKnown RBP12.2□□□□□ -0.46
CHTOP-206ENST00000495554 TFF3Q07654 80 aa12.2□□□□□ -0.46
CHTOP-206ENST00000495554 PDLIM3Q53GG5 364 aaPredicted RBP12.2□□□□□ -0.46
CHTOP-206ENST00000495554 TMEM108Q6UXF1 575 aa12.2□□□□□ -0.46
CHTOP-206ENST00000495554 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.2□□□□□ -0.46
CHTOP-206ENST00000495554 Q8TCH9 128 aa12.2□□□□□ -0.46
CHTOP-206ENST00000495554 ACTR3CQ9C0K3 210 aaPredicted RBP12.2□□□□□ -0.46
CHTOP-206ENST00000495554 TMPRSS5Q9H3S3 457 aa12.2□□□□□ -0.46
CHTOP-206ENST00000495554 ATXN7O15265 892 aaPredicted RBP12.2□□□□□ -0.46
CHTOP-206ENST00000495554 DDB2Q92466 427 aa12.2□□□□□ -0.46
CHTOP-206ENST00000495554 JKAMPQ9P055 326 aa12.2□□□□□ -0.46
CHTOP-206ENST00000495554 TLN1Q9Y490 2541 aaKnown RBP12.19□□□□□ -0.46
CHTOP-206ENST00000495554 DSCAMO60469 2012 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms