RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NAA38Q9BRA0 125 aaKnown RBP3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 DOHHQ9BU89 302 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 MRPL20Q9BYC9 149 aaKnown RBP3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 REG4Q9BYZ8 158 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 VSIRQ9H7M9 311 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 SPANXB1Q9NS25 103 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 DOK5Q9P104 306 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 RSL24D1Q9UHA3 163 aaKnown RBP3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 LAMTOR2Q9Y2Q5 125 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF780BQ9Y6R6 833 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 NOTCH2Q04721 2471 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 SETD1AO15047 1707 aaKnown RBP3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 LOXHD1Q8IVV2 1947 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 KTN1Q86UP2 1357 aaKnown RBP3□□□□□ -1.93
HMGB1P13-201ENST00000406019 MIA3Q5JRA6 1907 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 TRAV36DV7A0A075B6V5 113 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 TRAV30A0A087WSZ9 112 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 IGKV1-6A0A0C4DH72 117 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 DAPL1A0PJW8 107 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 TMEM218A2RU14 115 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 TMEM189A5PLL7 270 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF850A8MQ14 1090 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 UPK2O00526 184 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 UBFD1O14562 309 aaKnown RBP3□□□□□ -1.93
HMGB1P13-201ENST00000406019 FFAR1O14842 300 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 IGKV1-39P01597 117 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 HLA-DQB1P01920 261 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 IGKV1D-39P04432 117 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 SERPINE1P05121 402 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 CRYBA1P05813 215 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 CPMP14384 443 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 CXCL2P19875 107 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 CXCL3P19876 107 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 CD34P28906 385 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 BLVRBP30043 206 aaPredicted RBP3□□□□□ -1.93
HMGB1P13-201ENST00000406019 EBPQ15125 230 aaKnown RBP3□□□□□ -1.93
HMGB1P13-201ENST00000406019 ACOT6Q3I5F7 207 aaPredicted RBP3□□□□□ -1.93
HMGB1P13-201ENST00000406019 HIST2H3PS2Q5TEC6 136 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 MORN3Q6PF18 240 aaPredicted RBP3□□□□□ -1.93
HMGB1P13-201ENST00000406019 AGTRAPQ6RW13 159 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 NEGR1Q7Z3B1 354 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 NAA40Q86UY6 237 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 ORMDL3Q8N138 153 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR13C8Q8NGS7 320 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 PITX2Q99697 317 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 C20orf27Q9GZN8 174 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 GTSF1LQ9H1H1 148 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR51I2Q9H344 312 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 RNF122Q9H9V4 155 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 PARP11Q9NR21 331 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 MRPL16Q9NX20 251 aaKnown RBP3□□□□□ -1.93
HMGB1P13-201ENST00000406019 PRNDQ9UKY0 176 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P13-201ENST00000406019 INSIG2Q9Y5U4 225 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 SNX10Q9Y5X0 201 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 FANCAO15360 1455 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 RTEL1-TNFRSF6BF6WH68 1400 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 MYO5BQ9ULV0 1848 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 SCN1AP35498 2009 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 FRMPD1Q5SYB0 1578 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 A0A1W2PP64 1363 aa3□□□□□ -1.93
HMGB1P13-201ENST00000406019 MYO10Q9HD67 2058 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 POLA1P09884 1462 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 TCOF1Q13428 1488 aaKnown RBP2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 IGLV3-16A0A075B6K0 115 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 LOC389332A0A1B0GUA5 103 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 C1orf196B1AJZ1 125 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 J3KT08 172 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 PGLYRP1O75594 196 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 OPN1SWP03999 348 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 GYPCP04921 128 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 CSN2P05814 226 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 TRAPPC2P0DI81 140 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 TRAPPC2BP0DI82 140 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 IL7P13232 177 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 CSRP1P21291 193 aaKnown RBP2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 NPY1RP25929 384 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR1E2P47887 323 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 RAB5CP51148 216 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 HSPE1P61604 102 aaKnown RBP2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 MRPS10P82664 201 aaKnown RBP2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 RHOGP84095 191 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 COL5A1-AS1Q5SY13 56 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 AKR1C8PQ5T2L2 129 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 TEX36Q5VZQ5 186 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZFAND6Q6FIF0 208 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 TBPL2Q6SJ96 375 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 EXOC3-AS1Q8N2X6 119 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 THEM6Q8WUY1 208 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 DEDD2Q8WXF8 326 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 GPR146Q96CH1 333 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 FMC1Q96HJ9 113 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 MGLLQ99685 303 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 TMEM126AQ9H061 195 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 SND1-IT1Q9HBX3 110 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 UBQLN4Q9NRR5 601 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 DMAC2Q9NW81 257 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 MED9Q9NWA0 146 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 SCN3BQ9NY72 215 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 C21orf62Q9NYP8 219 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms