RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 OR13D1Q8NGV5 346 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 MCFD2Q8NI22 146 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 ABHD3Q8WU67 409 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 RPUSD4Q96CM3 377 aaKnown RBP4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 SLIRPQ9GZT3 109 aaKnown RBP4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 SLCO1B3Q9NPD5 702 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 CALML5Q9NZT1 146 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 NUFIP1Q9UHK0 495 aaKnown RBP4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 SMPXQ9UHP9 88 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 PCTPQ9UKL6 214 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 PSG11Q9UQ72 335 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 SLC25A15Q9Y619 301 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 CMYA5Q8N3K9 4069 aa4.45□□□□□ -1.7
TGFBR1-208ENST00000550253 CADP27708 2225 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 IGLV3-32A0A0A0MS00 114 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 E7EQL1 145 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 M0R143 59 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 HPGDSO60760 199 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 IL3P08700 152 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 TSPAN19P0C672 248 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 P0C879 139 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 MYL9P24844 172 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 SLC6A1P30531 599 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 APOC4P55056 127 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 WNT4P56705 351 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 IL5RAQ01344 420 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 MXD1Q05195 221 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 CLINT1Q14677 625 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 KIAA0087Q14695 138 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 OR7A5Q15622 319 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 NEDD8Q15843 81 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 NRF1Q16656 503 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 MRGPRG-AS1Q2M3A8 158 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 AKIRIN2Q53H80 203 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 CASC10Q5T4H9 136 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 NXNL2Q5VZ03 156 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 OR2W3Q7Z3T1 314 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 RBM45Q8IUH3 476 aaKnown RBP4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 SNX29P2Q8IUI4 249 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 CBLN2Q8IUK8 224 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 OR8J3Q8NGG0 315 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 TERB2Q8NHR7 220 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 C10orf105Q8TEF2 133 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 ZNF431Q8TF32 576 aaPredicted RBP4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 CYGBQ8WWM9 190 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 NIPSNAP1Q9BPW8 284 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 CMSS1Q9BQ75 279 aaKnown RBP4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 ZNF426Q9BUY5 554 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 ZNF430Q9H8G1 570 aaPredicted RBP4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 SLC25A22Q9H936 323 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 LRTM1Q9HBL6 345 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 ALPK2Q86TB3 2170 aa4.44□□□□□ -1.7
TGFBR1-208ENST00000550253 IGHV3-15A0A0B4J1V0 119 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 FABP12A6NFH5 140 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 KRTAP4-16G5E9R7 235 aaPredicted RBP4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 H7C417 338 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 UPK1AO00322 258 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 LYZL6O75951 148 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 ATG12O94817 140 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 UTS2O95399 124 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 C6orf47O95873 294 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 IFNA21P01568 189 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 APOC3P02656 99 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 THY1P04216 161 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 HSPB1P04792 205 aaKnown RBP4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 CRYBA1P05813 215 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 GKN3PP0CG01 181 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 S100A2P29034 98 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 FGF8P55075 233 aaPredicted RBP4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 CTBP2P56545 445 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 KLF3P57682 345 aaPredicted RBP4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 RPS20P60866 119 aaKnown RBP4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 QPRTQ15274 297 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 SLC9A3R2Q15599 337 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 VAMP3Q15836 100 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 ATP6V1FQ16864 119 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 PLPPR5Q32ZL2 321 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 XAF1Q6GPH4 301 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 NAA40Q86UY6 237 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 OR8D4Q8NGM9 314 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 OR5K1Q8NHB7 308 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 TYMSOSQ8TAI1 123 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 BAALCQ8WXS3 180 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 P2RX4Q99571 388 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 NICN1Q9BSH3 213 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 MAP1LC3CQ9BXW4 147 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 EBPLQ9BY08 206 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 GFRA4Q9GZZ7 299 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 CDC42EP4Q9H3Q1 356 aaKnown RBP4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 GSKIPQ9P0R6 139 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 ST3GAL6Q9Y274 331 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 ZNF780BQ9Y6R6 833 aa4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 PRKDCP78527 4128 aaKnown RBP4.43□□□□□ -1.7
TGFBR1-208ENST00000550253 TRAV39A0A0B4J263 110 aa4.42□□□□□ -1.7
TGFBR1-208ENST00000550253 A0A0B4J2A0 478 aa4.42□□□□□ -1.7
TGFBR1-208ENST00000550253 A0A1W2PRF3 423 aa4.42□□□□□ -1.7
TGFBR1-208ENST00000550253 A0A1W2PRM7 423 aa4.42□□□□□ -1.7
TGFBR1-208ENST00000550253 PSMB11A5LHX3 300 aa4.42□□□□□ -1.7
TGFBR1-208ENST00000550253 CLDN24A6NM45 220 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms