RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 EREGO14944 169 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 TRGV3P03979 118 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 C1orf185Q5T7R7 199 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 SELENOPP49908 381 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 MMP16P51512 607 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 BIVMQ86UB2 503 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 GVQW1Q8N7I0 195 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 PLA2G2FQ9BZM2 168 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 USP54Q70EL1 1684 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 ASAH2BP0C7U1 165 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 MARS2Q96GW9 593 aaKnown RBP10.44□□□□□ -0.74
PCF11-201ENST00000298281 CT62P0C5K7 136 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 RND2P52198 227 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 SERF2P84101 59 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 SIGLEC14Q08ET2 396 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 ZNF818PQ6ZRF7 136 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 PRR13Q9NZ81 148 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 ZNF646O15015 1829 aaPredicted RBP10.44□□□□□ -0.74
PCF11-201ENST00000298281 CDC42EP2O14613 210 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 CLPSP04118 112 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 HOXA5P20719 270 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 TMEM86BQ8N661 226 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 NRIP2Q9BQI9 281 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 DUSP15Q9H1R2 295 aaPredicted RBP10.44□□□□□ -0.74
PCF11-201ENST00000298281 WBP1LQ9NX94 342 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 FLRT3Q9NZU0 649 aa10.44□□□□□ -0.74
PCF11-201ENST00000298281 IGSF11Q5DX21 431 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 CCL13Q99616 98 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 FAM60AQ9NP50 221 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 CA1P00915 261 aaPredicted RBP10.43□□□□□ -0.74
PCF11-201ENST00000298281 P2RY6Q15077 328 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 FAM71F2Q6NXP2 309 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 C16orf47Q6ZP98 133 aaPredicted RBP10.43□□□□□ -0.74
PCF11-201ENST00000298281 SEMA5BQ9P283 1151 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 MPZL1O95297 269 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 LINC00869P0C866 280 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 MESTQ5EB52 335 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 A0A1B0GTH9 108 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 HOXA6P31267 233 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 ZPLD1Q8TCW7 415 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 RPL36A-HNRNPH2H7BZ11 118 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 ACSF3Q4G176 576 aaPredicted RBP10.43□□□□□ -0.74
PCF11-201ENST00000298281 TMEM252Q8N6L7 170 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 PGLYRP3Q96LB9 341 aa10.43□□□□□ -0.74
PCF11-201ENST00000298281 PSG2P11465 335 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 LIFP15018 202 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 LIMS2Q7Z4I7 341 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 ATOH7Q8N100 152 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 NPVFQ9HCQ7 196 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 FOLR2P14207 255 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 AWAT1Q58HT5 328 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 PXMP4Q9Y6I8 212 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 SOCS1O15524 211 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 NEU3Q9UQ49 428 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 TNCP24821 2201 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 NDUFS5O43920 106 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 Q5PR19 223 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 LDLRAD2Q5SZI1 272 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 DENND4AQ7Z401 1863 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 A0A1B0GWB2 263 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 HLA-DRB1P01911 266 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 LINC00158P58513 81 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 PIGYQ3MUY2 71 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 SCGB3A1Q96QR1 104 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 TCRBV16S1A1N1A0A5B0 115 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 ADARB2-AS1A8MUL3 147 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 HPRT1P00492 218 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 C3orf36Q3SXR2 165 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 FAM209AQ5JX71 171 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 WDR81Q562E7 1941 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 STRCQ7RTU9 1775 aa10.42□□□□□ -0.74
PCF11-201ENST00000298281 NDUFA2O43678 99 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 VKORC1L1Q8N0U8 176 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 SDF2L1Q9HCN8 221 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 SPCS1Q9Y6A9 102 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 SPAARA0A1B0GVQ0 90 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 MT-ND6P03923 174 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 SRSF4Q08170 494 aaKnown RBP10.41□□□□□ -0.74
PCF11-201ENST00000298281 PQLC2Q6ZP29 291 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 H1FOOQ8IZA3 346 aaPredicted RBP10.41□□□□□ -0.74
PCF11-201ENST00000298281 RPP25Q9BUL9 199 aaKnown RBP10.41□□□□□ -0.74
PCF11-201ENST00000298281 PARLQ9H300 379 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 CCL28Q9NRJ3 127 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 TMEM74BQ9NUR3 256 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 ELF5Q9UKW6 265 aaPredicted RBP10.41□□□□□ -0.74
PCF11-201ENST00000298281 COL9A1P20849 921 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 EWSR1Q01844 656 aaKnown RBP eCLIP10.41□□□□□ -0.74
PCF11-201ENST00000298281 GBF1Q92538 1859 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 A0A0U1RQV5 110 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 C10orf111Q8N326 155 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 C11orf44Q8N8P7 122 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 REPIN1Q9BWE0 567 aaKnown RBP10.41□□□□□ -0.74
PCF11-201ENST00000298281 PEMTQ9UBM1 199 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 COL22A1Q8NFW1 1626 aaPredicted RBP10.41□□□□□ -0.74
PCF11-201ENST00000298281 IGHV3OR16-13A0A075B7E8 117 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 IGHV3-74A0A0B4J1X5 117 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 SYNGR3O43761 229 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 ZNF345Q14585 488 aa10.41□□□□□ -0.74
PCF11-201ENST00000298281 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
PCF11-201ENST00000298281 DCAF10Q5QP82 559 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms