RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 TMEM74BQ9NUR3 256 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 TRAV8-2A0A0B4J237 113 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 FAM219BQ5XKK7 198 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 ST6GALNAC3Q8NDV1 305 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 RAG2P55895 527 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 OR51G1Q8NGK1 321 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 YAE1D1Q9NRH1 226 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 MPDZO75970 2070 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 ABCA1O95477 2261 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 A0A1B0GTL3 188 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 OR2H2O95918 312 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 S100A7L2Q5SY68 101 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 SLIRPQ9GZT3 109 aaKnown RBP9.81□□□□□ -0.84
PTPN4-201ENST00000263708 NPIPB11E5RHQ5 1161 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 EIF3GO75821 320 aaKnown RBP eCLIP9.81□□□□□ -0.84
PTPN4-201ENST00000263708 CXCL3P19876 107 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 LOC390937A0A1W2PQ73 354 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 ABCA3Q99758 1704 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 ZNF826PQ6ZT77 177 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 PNKDQ8N490 385 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 MYO7BQ6PIF6 2116 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 A0A0U1RQV5 110 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 SNAI2O43623 268 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 CKS1BP61024 79 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 Q5PR19 223 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 C1orf174Q8IYL3 243 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 FAM60AQ9NP50 221 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 CA11O75493 328 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 OR4X2Q8NGF9 303 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 WDFY2Q96P53 400 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 CLEC7AQ9BXN2 247 aa9.81□□□□□ -0.84
PTPN4-201ENST00000263708 PATE3B3GLJ2 98 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 CTGFP29279 349 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 MPV17P39210 176 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 RPL32P62910 135 aaKnown RBP9.8□□□□□ -0.84
PTPN4-201ENST00000263708 SERF2P84101 59 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 OR9G4Q8NGQ1 327 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 TUBD1Q9UJT1 453 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 COL9A1P20849 921 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 FAM209BQ5JX69 171 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 LINC00305Q7Z4B0 112 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 WFIKKN1Q96NZ8 548 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 POLEQ07864 2286 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 CEACAM21Q3KPI0 293 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 MARVELD1Q9BSK0 173 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 SLC25A15Q9Y619 301 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 H0Y980 276 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 IGFBP6P24592 240 aaPredicted RBP9.8□□□□□ -0.84
PTPN4-201ENST00000263708 LTBRP36941 435 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 NSUN5P1Q3KNT7 163 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 ACSF3Q4G176 576 aaPredicted RBP9.8□□□□□ -0.84
PTPN4-201ENST00000263708 SAMD13Q5VXD3 122 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 MARS2Q96GW9 593 aaKnown RBP9.8□□□□□ -0.84
PTPN4-201ENST00000263708 HRKO00198 91 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 MOSP00540 346 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 TSPAN7P41732 249 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 SLC25A2Q9BXI2 301 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 ST6GALNAC2Q9UJ37 374 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 ARFGEF1Q9Y6D6 1849 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 CLDND2Q8NHS1 167 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 TGIF2-C20orf24A0A0A6YYL0 155 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 NPIPB4C9JG80 1138 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 MGST3O14880 152 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 CRYBB3P26998 211 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 ARAP2Q8WZ64 1704 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 GRIFINA4D1Z8 144 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 TRIOBPQ9H2D6 2365 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 DOCK3Q8IZD9 2030 aa9.8□□□□□ -0.84
PTPN4-201ENST00000263708 SCTP09683 121 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 A0A1B0GV90 55 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 TMEM50AO95807 157 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 SPCS1Q9Y6A9 102 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 TCF23Q7RTU1 214 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 KLK13Q9UKR3 277 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 PEX7O00628 323 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 CD8AP01732 235 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 LIPFP07098 398 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 MEF2BQ02080 365 aaPredicted RBP9.79□□□□□ -0.84
PTPN4-201ENST00000263708 SFTA2Q6UW10 78 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 SCN5AQ14524 2016 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 IFNL4K9M1U5 179 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 STPG1Q5TH74 334 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 GLMPQ8WWB7 406 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 TRAV24A0A0B4J272 114 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 ALX4Q9H161 411 aaPredicted RBP9.79□□□□□ -0.84
PTPN4-201ENST00000263708 PCOLCEQ15113 449 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 NRN1LQ496H8 165 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 ATG4DQ86TL0 474 aaPredicted RBP9.79□□□□□ -0.84
PTPN4-201ENST00000263708 KCNS1Q96KK3 526 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 ARFGEF3Q5TH69 2177 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 FOXH1O75593 365 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 ATP5LO75964 103 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 OR10J3Q5JRS4 329 aa9.79□□□□□ -0.84
PTPN4-201ENST00000263708 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
PTPN4-201ENST00000263708 EFNB1P98172 346 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 OR11H7Q8NGC8 314 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 EGR1P18146 543 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 VDAC2P45880 294 aaPredicted RBP9.78□□□□□ -0.84
PTPN4-201ENST00000263708 DTX2Q86UW9 622 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms