RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W RMD8P43620 662 aa8.02□□□□□ -1.13
NUP53YMR153W YJR079WP47126 109 aa8.02□□□□□ -1.13
NUP53YMR153W RSC1P53236 928 aa8.02□□□□□ -1.13
NUP53YMR153W YNL144CP53907 740 aa8.02□□□□□ -1.13
NUP53YMR153W PMT7Q06644 662 aa8.02□□□□□ -1.13
NUP53YMR153W SIL1Q08199 421 aa8.02□□□□□ -1.13
NUP53YMR153W FLC1Q08967 793 aa8.02□□□□□ -1.13
NUP53YMR153W RRP6Q12149 733 aaKnown RBP8.02□□□□□ -1.13
NUP53YMR153W CCP1P00431 361 aa8.01□□□□□ -1.13
NUP53YMR153W PAB1P04147 577 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
NUP53YMR153W REV1P12689 985 aa8.01□□□□□ -1.13
NUP53YMR153W CSE1P33307 960 aa8.01□□□□□ -1.13
NUP53YMR153W HSL7P38274 827 aa8.01□□□□□ -1.13
NUP53YMR153W RTT107P38850 1070 aa8.01□□□□□ -1.13
NUP53YMR153W PRK1P40494 810 aa8.01□□□□□ -1.13
NUP53YMR153W ERG10P41338 398 aaKnown RBP8.01□□□□□ -1.13
NUP53YMR153W COP1P53622 1201 aaKnown RBP8.01□□□□□ -1.13
NUP53YMR153W CWC24P53769 259 aa8.01□□□□□ -1.13
NUP53YMR153W CAF120P53836 1060 aa8.01□□□□□ -1.13
NUP53YMR153W LCB4Q12246 624 aa8.01□□□□□ -1.13
NUP53YMR153W TDA3P38758 523 aa8□□□□□ -1.13
NUP53YMR153W SMC2P38989 1170 aaKnown RBP8□□□□□ -1.13
NUP53YMR153W SAP185P40856 1058 aa8□□□□□ -1.13
NUP53YMR153W HXT8P40886 569 aa8□□□□□ -1.13
NUP53YMR153W RTN1Q04947 295 aaKnown RBP8□□□□□ -1.13
NUP53YMR153W AIM39Q08223 395 aa8□□□□□ -1.13
NUP53YMR153W MSB2P32334 1306 aa8□□□□□ -1.13
NUP53YMR153W YIH1P25637 258 aa7.99□□□□□ -1.13
NUP53YMR153W SEC1P30619 724 aaKnown RBP7.99□□□□□ -1.13
NUP53YMR153W PXL1P36166 706 aa7.99□□□□□ -1.13
NUP53YMR153W MRPL10P36520 322 aa7.99□□□□□ -1.13
NUP53YMR153W RKM3P38222 552 aa7.99□□□□□ -1.13
NUP53YMR153W URA8P38627 578 aaPredicted RBP7.99□□□□□ -1.13
NUP53YMR153W HEM14P40012 539 aa7.99□□□□□ -1.13
NUP53YMR153W YER189WP40104 122 aa7.99□□□□□ -1.13
NUP53YMR153W PUS2P53167 370 aa7.99□□□□□ -1.13
NUP53YMR153W YPL014WQ02606 381 aa7.99□□□□□ -1.13
NUP53YMR153W AIM32Q04689 311 aa7.99□□□□□ -1.13
NUP53YMR153W GUT1P32190 709 aa7.98□□□□□ -1.13
NUP53YMR153W YKL050CP35736 922 aa7.98□□□□□ -1.13
NUP53YMR153W PPX1P38698 397 aa7.98□□□□□ -1.13
NUP53YMR153W NMD3P38861 518 aaKnown RBP7.98□□□□□ -1.13
NUP53YMR153W YAP5P40574 245 aa7.98□□□□□ -1.13
NUP53YMR153W SNZ3P43545 298 aa7.98□□□□□ -1.13
NUP53YMR153W BST1P43571 1029 aa7.98□□□□□ -1.13
NUP53YMR153W PRP24P49960 444 aaKnown RBP7.98□□□□□ -1.13
NUP53YMR153W TRM112P53738 135 aaPredicted RBP7.98□□□□□ -1.13
NUP53YMR153W SNZ2P53824 298 aa7.98□□□□□ -1.13
NUP53YMR153W VPS75P53853 264 aa7.98□□□□□ -1.13
NUP53YMR153W RKM2Q03942 479 aa7.98□□□□□ -1.13
NUP53YMR153W GYL1Q04322 720 aa7.98□□□□□ -1.13
NUP53YMR153W ECM38Q05902 660 aaPredicted RBP7.98□□□□□ -1.13
NUP53YMR153W AAD4Q07747 329 aa7.98□□□□□ -1.13
NUP53YMR153W YRR1Q12172 810 aa7.98□□□□□ -1.13
NUP53YMR153W VPS5Q92331 675 aa7.98□□□□□ -1.13
NUP53YMR153W SEN1Q00416 2231 aaKnown RBP7.97□□□□□ -1.13
NUP53YMR153W BI2P03873 423 aa7.97□□□□□ -1.13
NUP53YMR153W BI4P03879 638 aa7.97□□□□□ -1.13
NUP53YMR153W PUT4P15380 627 aa7.97□□□□□ -1.13
NUP53YMR153W SEC6P32844 805 aa7.97□□□□□ -1.13
NUP53YMR153W GDH3P39708 457 aa7.97□□□□□ -1.13
NUP53YMR153W YIR007WP40566 764 aa7.97□□□□□ -1.13
NUP53YMR153W CNN1P43618 361 aa7.97□□□□□ -1.13
NUP53YMR153W RTT101P47050 842 aa7.97□□□□□ -1.13
NUP53YMR153W YGR111WP53265 400 aa7.97□□□□□ -1.13
NUP53YMR153W KTR6P54070 446 aa7.97□□□□□ -1.13
NUP53YMR153W INA17Q02888 182 aa7.97□□□□□ -1.13
NUP53YMR153W ELP3Q02908 557 aaKnown RBP7.97□□□□□ -1.13
NUP53YMR153W YDR222WQ04925 415 aa7.97□□□□□ -1.13
NUP53YMR153W HMI1Q12039 706 aa7.97□□□□□ -1.13
NUP53YMR153W BI3Q9ZZW7 517 aa7.97□□□□□ -1.13
NUP53YMR153W MSF1P08425 469 aa7.96□□□□□ -1.13
NUP53YMR153W PHO13P19881 312 aa7.96□□□□□ -1.13
NUP53YMR153W ROX1P25042 368 aa7.96□□□□□ -1.13
NUP53YMR153W MRPL32P25348 183 aa7.96□□□□□ -1.13
NUP53YMR153W VEL1P53058 206 aa7.96□□□□□ -1.13
NUP53YMR153W YGR283CP53336 341 aaPredicted RBP7.96□□□□□ -1.13
NUP53YMR153W DOS2P54858 310 aa7.96□□□□□ -1.13
NUP53YMR153W YMR206WQ03695 313 aa7.96□□□□□ -1.13
NUP53YMR153W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.96□□□□□ -1.13not detected
NUP53YMR153W SPO12P17123 173 aa7.95□□□□□ -1.14
NUP53YMR153W MET16P18408 261 aaPredicted RBP7.95□□□□□ -1.14
NUP53YMR153W ARF2P19146 181 aaKnown RBP7.95□□□□□ -1.14
NUP53YMR153W FPR1P20081 114 aaKnown RBP7.95□□□□□ -1.14
NUP53YMR153W MET22P32179 357 aa7.95□□□□□ -1.14
NUP53YMR153W STE13P33894 931 aa7.95□□□□□ -1.14
NUP53YMR153W TCD2P36101 447 aaKnown RBP7.95□□□□□ -1.14
NUP53YMR153W LYS9P38999 446 aa7.95□□□□□ -1.14
NUP53YMR153W OSW5P40219 148 aa7.95□□□□□ -1.14
NUP53YMR153W TAN1P53072 289 aaPredicted RBP7.95□□□□□ -1.14
NUP53YMR153W YNL035CP53962 389 aaKnown RBP7.95□□□□□ -1.14
NUP53YMR153W RPN4Q03465 531 aa7.95□□□□□ -1.14
NUP53YMR153W YCS4Q06156 1176 aa7.95□□□□□ -1.14
NUP53YMR153W OPY2Q06810 360 aa7.95□□□□□ -1.14
NUP53YMR153W ATG9Q12142 997 aa7.95□□□□□ -1.14
NUP53YMR153W ACC1Q00955 2233 aaKnown RBP7.95□□□□□ -1.14
NUP53YMR153W CYC8P14922 966 aa7.95□□□□□ -1.14
NUP53YMR153W NCL1P38205 684 aaKnown RBP7.95□□□□□ -1.14
NUP53YMR153W GIP1P38229 639 aa7.95□□□□□ -1.14
NUP53YMR153W GIP4P39732 760 aa7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 79 ms