RNA–Protein interactions for RNA: YMR001C

CDC5, Transcript of Polo-like kinase, yeast

Gene CDC5, Length 2,118 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC5	YMR001C	CTK1	Q03957	528 aa	Known RBP	4.14	□□□□□ -1.75
CDC5	YMR001C	DLT1	Q04216	342 aa		4.14	□□□□□ -1.75
CDC5	YMR001C	FRE5	Q08908	694 aa		4.14	□□□□□ -1.75
CDC5	YMR001C	URA3	P03962	267 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	ERG20	P08524	352 aa	Known RBP	4.13	□□□□□ -1.75
CDC5	YMR001C	THR1	P17423	357 aa	Known RBP	4.13	□□□□□ -1.75
CDC5	YMR001C	YKL133C	P36066	463 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	SET3	P36124	751 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	COS111	P38308	924 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	ACA1	P39970	489 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	KHA1	P40309	873 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	VBA4	Q04602	768 aa	Known RBP	4.13	□□□□□ -1.75
CDC5	YMR001C	ARP7	Q12406	477 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	CAF20	P12962	161 aa	Known RBP	4.13	□□□□□ -1.75
CDC5	YMR001C	YCR015C	P25616	317 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	TGL1	P34163	548 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	PHO11	P35842	467 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	PHO12	P38693	467 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	STT3	P39007	718 aa	Known RBP	4.13	□□□□□ -1.75
CDC5	YMR001C	COX18	P53239	316 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
CDC5	YMR001C	SGO1	Q08490	590 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	VPS5	Q92331	675 aa		4.13	□□□□□ -1.75
CDC5	YMR001C	NCP1	P16603	691 aa	Known RBP	4.12	□□□□□ -1.75
CDC5	YMR001C	CWH43	P25618	953 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	PRP45	P28004	379 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC5	YMR001C	YHR033W	P38690	423 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	SFB3	P38810	929 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	UBP5	P39944	805 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	YIL077C	P40508	320 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	ARC35	P53731	342 aa	Known RBP	4.12	□□□□□ -1.75
CDC5	YMR001C	TEP1	P53916	434 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	YCG1	Q06680	1035 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	SEC18	P18759	758 aa	Known RBP	4.12	□□□□□ -1.75
CDC5	YMR001C	HCM1	P25364	564 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	DGR2	P32330	852 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	FDC1	Q03034	503 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	PSF3	Q12146	194 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	YKL033W-A	Q86ZR7	236 aa		4.12	□□□□□ -1.75
CDC5	YMR001C	PPR1	P07272	904 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC5	YMR001C	VAS1	P07806	1104 aa	Known RBP	4.11	□□□□□ -1.75
CDC5	YMR001C	CBP3	P21560	335 aa		4.11	□□□□□ -1.75
CDC5	YMR001C	HRR25	P29295	494 aa	Known RBP	4.11	□□□□□ -1.75
CDC5	YMR001C	PPS1	P38148	807 aa		4.11	□□□□□ -1.75
CDC5	YMR001C	FMP52	P40008	231 aa		4.11	□□□□□ -1.75
CDC5	YMR001C	POL31	P46957	487 aa		4.11	□□□□□ -1.75
CDC5	YMR001C	IZH3	Q07959	543 aa		4.11	□□□□□ -1.75
CDC5	YMR001C	ESC8	Q08119	714 aa		4.11	□□□□□ -1.75
CDC5	YMR001C	YOL073C	Q08232	322 aa		4.11	□□□□□ -1.75
CDC5	YMR001C	CHS5	Q12114	671 aa	Known RBP	4.11	□□□□□ -1.75
CDC5	YMR001C	ALG7	P07286	448 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	GFA1	P14742	717 aa	Known RBP	4.1	□□□□□ -1.75
CDC5	YMR001C	KIN82	P25341	720 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	APT2	P36973	181 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	CHS7	P38843	316 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	MPS3	P47069	682 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	HOL1	P53389	586 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	ACS1	Q01574	713 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	TRS130	Q03660	1102 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	BUD21	Q08492	214 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC5	YMR001C	MVD1	P32377	396 aa	Known RBP	4.1	□□□□□ -1.75
CDC5	YMR001C	YHR097C	P38809	366 aa	Known RBP	4.1	□□□□□ -1.75
CDC5	YMR001C	LRO1	P40345	661 aa		4.1	□□□□□ -1.75
CDC5	YMR001C	ENP2	P48234	707 aa	Known RBP	4.1	□□□□□ -1.75
CDC5	YMR001C	RRT6	P53117	311 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC5	YMR001C	RPS15	Q01855	142 aa	Known RBP	4.1	□□□□□ -1.75
CDC5	YMR001C	PMI40	P29952	429 aa	Known RBP	4.09	□□□□□ -1.75
CDC5	YMR001C	MRPL7	P36519	292 aa		4.09	□□□□□ -1.75
CDC5	YMR001C	PUG1	P40100	303 aa		4.09	□□□□□ -1.75
CDC5	YMR001C	BFA1	P47113	574 aa		4.09	□□□□□ -1.75
CDC5	YMR001C	SPO1	P53541	631 aa		4.09	□□□□□ -1.75
CDC5	YMR001C	CPR6	P53691	371 aa	Known RBP	4.09	□□□□□ -1.75
CDC5	YMR001C	RNT1	Q02555	471 aa		4.09	□□□□□ -1.75
CDC5	YMR001C	MUK1	Q02866	612 aa		4.09	□□□□□ -1.75
CDC5	YMR001C	YBR138C	P38277	524 aa		4.09	□□□□□ -1.76
CDC5	YMR001C	SSP120	P39931	234 aa	Known RBP	4.09	□□□□□ -1.76
CDC5	YMR001C	GSM1	P42950	618 aa		4.09	□□□□□ -1.76
CDC5	YMR001C	TAH11	P47112	604 aa		4.09	□□□□□ -1.76
CDC5	YMR001C	UBA2	P52488	636 aa		4.09	□□□□□ -1.76
CDC5	YMR001C	COS12	P53053	380 aa		4.09	□□□□□ -1.76
CDC5	YMR001C	SUN4	P53616	420 aa		4.09	□□□□□ -1.76
CDC5	YMR001C	USA1	Q03714	838 aa		4.09	□□□□□ -1.76
CDC5	YMR001C	MCH5	Q08777	521 aa		4.09	□□□□□ -1.76
CDC5	YMR001C	RPS9B	P05755	195 aa	Known RBP	4.08	□□□□□ -1.76
CDC5	YMR001C	MET3	P08536	511 aa		4.08	□□□□□ -1.76
CDC5	YMR001C	MSM1	P22438	575 aa		4.08	□□□□□ -1.76
CDC5	YMR001C	PRP28	P23394	588 aa		4.08	□□□□□ -1.76
CDC5	YMR001C	STB5	P38699	743 aa		4.08	□□□□□ -1.76
CDC5	YMR001C	TMN3	P40071	706 aa		4.08	□□□□□ -1.76
CDC5	YMR001C	YGR054W	P53235	642 aa	Known RBP	4.08	□□□□□ -1.76
CDC5	YMR001C	HIM1	Q06674	414 aa		4.08	□□□□□ -1.76
CDC5	YMR001C	ZRT2	Q12436	422 aa		4.08	□□□□□ -1.76
CDC5	YMR001C	PRP22	P24384	1145 aa	Known RBP	4.07	□□□□□ -1.76
CDC5	YMR001C	SWI4	P25302	1093 aa	Known RBP	4.07	□□□□□ -1.76
CDC5	YMR001C	CTP1	P38152	299 aa		4.07	□□□□□ -1.76
CDC5	YMR001C	APM3	P38153	483 aa		4.07	□□□□□ -1.76
CDC5	YMR001C	YLF2	P38746	405 aa		4.07	□□□□□ -1.76
CDC5	YMR001C	TEL2	P53038	688 aa		4.07	□□□□□ -1.76
CDC5	YMR001C	PPN1	Q04119	674 aa		4.07	□□□□□ -1.76
CDC5	YMR001C	TRI1	Q05024	226 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms