RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C FAF1P40546 346 aaPredicted RBP7.47□□□□□ -1.21
ATG17YLR423C ERG5P54781 538 aa7.47□□□□□ -1.21
ATG17YLR423C HIS7P33734 552 aaKnown RBP7.46□□□□□ -1.22
ATG17YLR423C RMA1P36001 430 aaKnown RBP7.46□□□□□ -1.22
ATG17YLR423C FMO1P38866 432 aa7.46□□□□□ -1.22
ATG17YLR423C IMA5P40884 581 aa7.46□□□□□ -1.22
ATG17YLR423C MAD2P40958 196 aa7.46□□□□□ -1.22
ATG17YLR423C YNR071CP53757 342 aa7.46□□□□□ -1.22
ATG17YLR423C YML131WQ03102 365 aa7.46□□□□□ -1.22
ATG17YLR423C THI22Q06490 572 aa7.46□□□□□ -1.22
ATG17YLR423C YCG1Q06680 1035 aa7.46□□□□□ -1.22
ATG17YLR423C LAS17Q12446 633 aa7.46□□□□□ -1.22
ATG17YLR423C COS111P38308 924 aa7.45□□□□□ -1.22
ATG17YLR423C MPT5P39016 859 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
ATG17YLR423C VID27P40157 782 aa7.45□□□□□ -1.22
ATG17YLR423C BAP3P41815 604 aa7.45□□□□□ -1.22
ATG17YLR423C ERR3P42222 437 aa7.45□□□□□ -1.22
ATG17YLR423C TAH11P47112 604 aa7.45□□□□□ -1.22
ATG17YLR423C TMA64Q04600 565 aaKnown RBP7.45□□□□□ -1.22
ATG17YLR423C TRI1Q05024 226 aa7.45□□□□□ -1.22
ATG17YLR423C DIN7Q12086 430 aa7.45□□□□□ -1.22
ATG17YLR423C SSM4P40318 1319 aa7.45□□□□□ -1.22
ATG17YLR423C PHO5P00635 467 aa7.44□□□□□ -1.22
ATG17YLR423C SHM2P37291 469 aaKnown RBP7.44□□□□□ -1.22
ATG17YLR423C YLF2P38746 405 aa7.44□□□□□ -1.22
ATG17YLR423C REV7P38927 245 aa7.44□□□□□ -1.22
ATG17YLR423C RPT2P40327 437 aaKnown RBP7.44□□□□□ -1.22
ATG17YLR423C TAF1P46677 1066 aa7.44□□□□□ -1.22
ATG17YLR423C TUF1P02992 437 aaKnown RBP7.43□□□□□ -1.22
ATG17YLR423C URA3P03962 267 aa7.43□□□□□ -1.22
ATG17YLR423C SEC12P11655 471 aa7.43□□□□□ -1.22
ATG17YLR423C RNQ1P25367 405 aa7.43□□□□□ -1.22
ATG17YLR423C FEN2P25621 512 aaKnown RBP7.43□□□□□ -1.22
ATG17YLR423C DCG1P32460 244 aa7.43□□□□□ -1.22
ATG17YLR423C MTC7P32633 139 aa7.43□□□□□ -1.22
ATG17YLR423C YBR053CP38235 358 aa7.43□□□□□ -1.22
ATG17YLR423C HOS4P40480 1083 aa7.43□□□□□ -1.22
ATG17YLR423C GTR1Q00582 310 aa7.43□□□□□ -1.22
ATG17YLR423C CLF1Q12309 687 aaPredicted RBP7.43□□□□□ -1.22
ATG17YLR423C GLT1Q12680 2145 aaKnown RBP7.42□□□□□ -1.22
ATG17YLR423C MIS1P09440 975 aaKnown RBP7.42□□□□□ -1.22
ATG17YLR423C TUP1P16649 713 aa7.42□□□□□ -1.22
ATG17YLR423C ARG1P22768 420 aa7.42□□□□□ -1.22
ATG17YLR423C BCS1P32839 456 aa7.42□□□□□ -1.22
ATG17YLR423C BCD1P38772 366 aa7.42□□□□□ -1.22
ATG17YLR423C SFB3P38810 929 aa7.42□□□□□ -1.22
ATG17YLR423C CRG1P38892 291 aaRIP-Chip data7.42□□□□□ -1.22not detected
ATG17YLR423C FTR1P40088 404 aa7.42□□□□□ -1.22
ATG17YLR423C YFT2Q06676 274 aa7.42□□□□□ -1.22
ATG17YLR423C AIM39Q08223 395 aa7.42□□□□□ -1.22
ATG17YLR423C ZRT2Q12436 422 aa7.42□□□□□ -1.22
ATG17YLR423C PCK1P10963 549 aa7.41□□□□□ -1.22
ATG17YLR423C POL3P15436 1097 aa7.41□□□□□ -1.22
ATG17YLR423C BEM3P32873 1128 aa7.41□□□□□ -1.22
ATG17YLR423C SPC72P39723 622 aa7.41□□□□□ -1.22
ATG17YLR423C AVT1P47082 602 aa7.41□□□□□ -1.22
ATG17YLR423C IRC13Q08630 104 aa7.41□□□□□ -1.22
ATG17YLR423C NUC1P08466 329 aa7.4□□□□□ -1.22
ATG17YLR423C PRP28P23394 588 aa7.4□□□□□ -1.22
ATG17YLR423C MCM3P24279 971 aaKnown RBP7.4□□□□□ -1.22
ATG17YLR423C ERG4P25340 473 aa7.4□□□□□ -1.22
ATG17YLR423C EFT1P32324 842 aaKnown RBP7.4□□□□□ -1.22
ATG17YLR423C NTH1P32356 751 aa7.4□□□□□ -1.22
ATG17YLR423C PSY4P38193 441 aa7.4□□□□□ -1.22
ATG17YLR423C CDS1P38221 457 aa7.4□□□□□ -1.22
ATG17YLR423C STT3P39007 718 aaKnown RBP7.4□□□□□ -1.22
ATG17YLR423C SMK1P41808 388 aa7.4□□□□□ -1.22
ATG17YLR423C RFX1P48743 811 aa7.4□□□□□ -1.22
ATG17YLR423C UBC11P52492 156 aa7.4□□□□□ -1.22
ATG17YLR423C FDC1Q03034 503 aa7.4□□□□□ -1.22
ATG17YLR423C YMR018WQ04364 514 aa7.4□□□□□ -1.22
ATG17YLR423C FRE5Q08908 694 aa7.4□□□□□ -1.22
ATG17YLR423C CHS5Q12114 671 aaKnown RBP7.4□□□□□ -1.22
ATG17YLR423C TMN3P40071 706 aa7.39□□□□□ -1.23
ATG17YLR423C YJL163CP46996 555 aa7.39□□□□□ -1.23
ATG17YLR423C CPR6P53691 371 aaKnown RBP7.39□□□□□ -1.23
ATG17YLR423C MRPL13Q02204 264 aa7.39□□□□□ -1.23
ATG17YLR423C SVL3Q03088 825 aaKnown RBP7.39□□□□□ -1.23
ATG17YLR423C CLU1Q03690 1277 aaKnown RBP7.39□□□□□ -1.23
ATG17YLR423C IWR1Q07532 353 aaPredicted RBP7.39□□□□□ -1.23
ATG17YLR423C CRD1Q07560 283 aa7.39□□□□□ -1.23
ATG17YLR423C PMA1P05030 918 aaKnown RBP7.38□□□□□ -1.23
ATG17YLR423C MRPL36P36531 177 aa7.38□□□□□ -1.23
ATG17YLR423C EHT1P38295 451 aa7.38□□□□□ -1.23
ATG17YLR423C YEL025CP39991 1188 aa7.38□□□□□ -1.23
ATG17YLR423C PSF2P40359 213 aa7.38□□□□□ -1.23
ATG17YLR423C PAN2P53010 1115 aaPredicted RBP7.38□□□□□ -1.23
ATG17YLR423C RNT1Q02555 471 aa7.38□□□□□ -1.23
ATG17YLR423C TIM50Q02776 476 aa7.38□□□□□ -1.23
ATG17YLR423C TRS130Q03660 1102 aa7.38□□□□□ -1.23
ATG17YLR423C ARA2Q04212 335 aa7.38□□□□□ -1.23
ATG17YLR423C AAD4Q07747 329 aa7.38□□□□□ -1.23
ATG17YLR423C SSP2Q08646 371 aa7.38□□□□□ -1.23
ATG17YLR423C YKL033W-AQ86ZR7 236 aa7.38□□□□□ -1.23
ATG17YLR423C SIR1P21691 654 aa7.37□□□□□ -1.23
ATG17YLR423C CLB4P24871 460 aa7.37□□□□□ -1.23
ATG17YLR423C HCM1P25364 564 aa7.37□□□□□ -1.23
ATG17YLR423C HRR25P29295 494 aaKnown RBP7.37□□□□□ -1.23
ATG17YLR423C PUG1P40100 303 aa7.37□□□□□ -1.23
ATG17YLR423C GSM1P42950 618 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 137.2 ms