RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C SEC15P22224 910 aa2.56□□□□□ -2
SGD1YLR336C PRP28P23394 588 aa2.56□□□□□ -2
SGD1YLR336C YHR097CP38809 366 aaKnown RBP2.56□□□□□ -2
SGD1YLR336C RRP8P38961 392 aaKnown RBP2.56□□□□□ -2
SGD1YLR336C PIG2P40187 538 aa2.56□□□□□ -2
SGD1YLR336C ENP2P48234 707 aaKnown RBP2.56□□□□□ -2
SGD1YLR336C PIP2P52960 996 aa2.56□□□□□ -2
SGD1YLR336C CNM67P53865 581 aaKnown RBP2.56□□□□□ -2
SGD1YLR336C NUR1Q12066 484 aa2.56□□□□□ -2
SGD1YLR336C DIN7Q12086 430 aa2.56□□□□□ -2
SGD1YLR336C NYV1Q12255 253 aa2.56□□□□□ -2
SGD1YLR336C HMG2P12684 1045 aa2.56□□□□□ -2
SGD1YLR336C HOP1P20050 605 aa2.56□□□□□ -2
SGD1YLR336C PCL5P38794 229 aa2.56□□□□□ -2
SGD1YLR336C TMN3P40071 706 aa2.56□□□□□ -2
SGD1YLR336C STB4P50104 949 aa2.56□□□□□ -2
SGD1YLR336C PEF1P53238 335 aa2.56□□□□□ -2
SGD1YLR336C HOL1P53389 586 aa2.56□□□□□ -2
SGD1YLR336C SPO1P53541 631 aa2.56□□□□□ -2
SGD1YLR336C YCG1Q06680 1035 aa2.56□□□□□ -2
SGD1YLR336C USV1Q12132 391 aa2.56□□□□□ -2
SGD1YLR336C YEF3P16521 1044 aaKnown RBP2.55□□□□□ -2
SGD1YLR336C PHO3P24031 467 aa2.55□□□□□ -2
SGD1YLR336C SCS2P40075 244 aaKnown RBP2.55□□□□□ -2
SGD1YLR336C YNR071CP53757 342 aa2.55□□□□□ -2
SGD1YLR336C RIA1P53893 1110 aa2.55□□□□□ -2
SGD1YLR336C ADH4P10127 382 aa2.55□□□□□ -2
SGD1YLR336C ARG1P22768 420 aa2.55□□□□□ -2
SGD1YLR336C HIS6P40545 261 aa2.55□□□□□ -2
SGD1YLR336C MOT3P54785 490 aaKnown RBP2.55□□□□□ -2
SGD1YLR336C FDC1Q03034 503 aa2.55□□□□□ -2
SGD1YLR336C IZH3Q07959 543 aa2.55□□□□□ -2
SGD1YLR336C YOL114CQ12322 202 aa2.55□□□□□ -2
SGD1YLR336C MSS18P08593 268 aa2.55□□□□□ -2
SGD1YLR336C PTP2P29461 750 aa2.55□□□□□ -2
SGD1YLR336C CTP1P38152 299 aa2.55□□□□□ -2
SGD1YLR336C YHL017WP38745 532 aa2.55□□□□□ -2
SGD1YLR336C ASK10P48361 1146 aa2.55□□□□□ -2
SGD1YLR336C PUS4P48567 403 aaKnown RBP2.55□□□□□ -2
SGD1YLR336C YAP1802P53309 568 aa2.55□□□□□ -2
SGD1YLR336C SQS1P53866 767 aaKnown RBP2.55□□□□□ -2
SGD1YLR336C SMX3P54999 86 aaPredicted RBP2.55□□□□□ -2
SGD1YLR336C VPS5Q92331 675 aa2.55□□□□□ -2
SGD1YLR336C URA3P03962 267 aa2.54□□□□□ -2
SGD1YLR336C APA1P16550 321 aaKnown RBP2.54□□□□□ -2
SGD1YLR336C CWH43P25618 953 aa2.54□□□□□ -2
SGD1YLR336C FUB1P25659 250 aa2.54□□□□□ -2
SGD1YLR336C TGL1P34163 548 aa2.54□□□□□ -2
SGD1YLR336C ELF1P36053 145 aa2.54□□□□□ -2
SGD1YLR336C YKL133CP36066 463 aa2.54□□□□□ -2
SGD1YLR336C CBR1P38626 284 aaKnown RBP2.54□□□□□ -2
SGD1YLR336C IMA5P40884 581 aa2.54□□□□□ -2
SGD1YLR336C NOP2P40991 618 aaKnown RBP2.54□□□□□ -2
SGD1YLR336C QRI7P43122 407 aa2.54□□□□□ -2
SGD1YLR336C YGR151CP53287 111 aa2.54□□□□□ -2
SGD1YLR336C SSL2Q00578 843 aa2.54□□□□□ -2
SGD1YLR336C CTF4Q01454 927 aa2.54□□□□□ -2
SGD1YLR336C MLC2Q06580 163 aa2.54□□□□□ -2
SGD1YLR336C ARR3Q06598 404 aa2.54□□□□□ -2
SGD1YLR336C YDL086WQ07505 273 aa2.54□□□□□ -2
SGD1YLR336C ACF2Q12168 779 aa2.54□□□□□ -2
SGD1YLR336C DBP10Q12389 995 aaKnown RBP2.54□□□□□ -2
SGD1YLR336C MOH1P38191 138 aa2.54□□□□□ -2
SGD1YLR336C YHL041WP38730 149 aa2.54□□□□□ -2
SGD1YLR336C TAH11P47112 604 aa2.54□□□□□ -2
SGD1YLR336C NMA2P53204 395 aa2.54□□□□□ -2
SGD1YLR336C SNF12P53628 566 aa2.54□□□□□ -2
SGD1YLR336C PSF3Q12146 194 aa2.54□□□□□ -2
SGD1YLR336C CBP3P21560 335 aa2.53□□□□□ -2
SGD1YLR336C KSP1P38691 1029 aaKnown RBP2.53□□□□□ -2
SGD1YLR336C YGR054WP53235 642 aaKnown RBP2.53□□□□□ -2
SGD1YLR336C DIP5P53388 608 aa2.53□□□□□ -2
SGD1YLR336C ATG4P53867 494 aa2.53□□□□□ -2
SGD1YLR336C HLR1Q04429 423 aa2.53□□□□□ -2
SGD1YLR336C URN1Q06525 465 aaKnown RBP2.53□□□□□ -2
SGD1YLR336C BRE1Q07457 700 aaKnown RBP2.53□□□□□ -2
SGD1YLR336C AIM41Q12032 185 aa2.53□□□□□ -2
SGD1YLR336C CLF1Q12309 687 aaPredicted RBP2.53□□□□□ -2
SGD1YLR336C VAS1P07806 1104 aaKnown RBP2.53□□□□□ -2
SGD1YLR336C PET309P32522 965 aaPredicted RBP2.53□□□□□ -2
SGD1YLR336C MRPL7P36519 292 aa2.53□□□□□ -2
SGD1YLR336C SWD1P39706 426 aa2.53□□□□□ -2
SGD1YLR336C LRO1P40345 661 aa2.53□□□□□ -2
SGD1YLR336C NDC80P40460 691 aa2.53□□□□□ -2
SGD1YLR336C CCT7P42943 550 aaKnown RBP2.53□□□□□ -2
SGD1YLR336C MAD3P47074 515 aa2.53□□□□□ -2
SGD1YLR336C GSF2Q04697 403 aaKnown RBP2.53□□□□□ -2
SGD1YLR336C MCH5Q08777 521 aa2.53□□□□□ -2
SGD1YLR336C RRP6Q12149 733 aaKnown RBP2.53□□□□□ -2
SGD1YLR336C NTH1P32356 751 aa2.52□□□□□ -2.01
SGD1YLR336C PMC1P38929 1173 aaPredicted RBP2.52□□□□□ -2.01
SGD1YLR336C SAW1P39735 261 aa2.52□□□□□ -2.01
SGD1YLR336C SDS3P40505 327 aa2.52□□□□□ -2.01
SGD1YLR336C MDR1P53258 950 aa2.52□□□□□ -2.01
SGD1YLR336C TEP1P53916 434 aa2.52□□□□□ -2.01
SGD1YLR336C ACS1Q01574 713 aa2.52□□□□□ -2.01
SGD1YLR336C ARP7Q12406 477 aa2.52□□□□□ -2.01
SGD1YLR336C PNS1Q12412 539 aa2.52□□□□□ -2.01
SGD1YLR336C PCK1P10963 549 aa2.52□□□□□ -2.01
SGD1YLR336C STB5P38699 743 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms