RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C GAA1P39012 614 aa4.7□□□□□ -1.66
CDC42YLR229C MBP1P39678 833 aa4.7□□□□□ -1.66
CDC42YLR229C TIF4631P39935 952 aaKnown RBP4.7□□□□□ -1.66
CDC42YLR229C SEC9P40357 651 aa4.7□□□□□ -1.66
CDC42YLR229C NIT1P40447 199 aa4.7□□□□□ -1.66
CDC42YLR229C YGR117CP53270 476 aa4.7□□□□□ -1.66
CDC42YLR229C SOL4P53315 255 aa4.7□□□□□ -1.66
CDC42YLR229C MFM1Q02783 413 aa4.7□□□□□ -1.66
CDC42YLR229C YML119WQ03208 357 aa4.7□□□□□ -1.66
CDC42YLR229C AIM33Q04516 312 aa4.7□□□□□ -1.66
CDC42YLR229C YLR287CQ05881 355 aa4.7□□□□□ -1.66
CDC42YLR229C YLH47Q06493 454 aa4.7□□□□□ -1.66
CDC42YLR229C HMI1Q12039 706 aa4.7□□□□□ -1.66
CDC42YLR229C RAD1P06777 1100 aa4.69□□□□□ -1.66
CDC42YLR229C RPL11AP0C0W9 174 aaKnown RBP4.69□□□□□ -1.66
CDC42YLR229C YEL076C-AP0CX16 216 aa4.69□□□□□ -1.66
CDC42YLR229C YLR464WP0CX17 216 aa4.69□□□□□ -1.66
CDC42YLR229C MTF2P10849 440 aa4.69□□□□□ -1.66
CDC42YLR229C OM45P16547 393 aa4.69□□□□□ -1.66
CDC42YLR229C KAR3P17119 729 aa4.69□□□□□ -1.66
CDC42YLR229C MRPS28P21771 286 aa4.69□□□□□ -1.66
CDC42YLR229C STE5P32917 917 aa4.69□□□□□ -1.66
CDC42YLR229C UBC6P33296 250 aaPredicted RBP4.69□□□□□ -1.66
CDC42YLR229C SUL1P38359 859 aa4.69□□□□□ -1.66
CDC42YLR229C SMC2P38989 1170 aaKnown RBP4.69□□□□□ -1.66
CDC42YLR229C CCC2P38995 1004 aa4.69□□□□□ -1.66
CDC42YLR229C YMR124WP39523 943 aaKnown RBP4.69□□□□□ -1.66
CDC42YLR229C GEM1P39722 662 aa4.69□□□□□ -1.66
CDC42YLR229C SAP1P39955 897 aaKnown RBP4.69□□□□□ -1.66
CDC42YLR229C YEL076CP39971 216 aa4.69□□□□□ -1.66
CDC42YLR229C YJR079WP47126 109 aa4.69□□□□□ -1.66
CDC42YLR229C FMS1P50264 508 aa4.69□□□□□ -1.66
CDC42YLR229C FOL2P51601 243 aaKnown RBP4.69□□□□□ -1.66
CDC42YLR229C NNF2P53253 936 aa4.69□□□□□ -1.66
CDC42YLR229C BTN2P53286 410 aa4.69□□□□□ -1.66
CDC42YLR229C SQS1P53866 767 aaKnown RBP4.69□□□□□ -1.66
CDC42YLR229C ERG5P54781 538 aa4.69□□□□□ -1.66
CDC42YLR229C DOS2P54858 310 aa4.69□□□□□ -1.66
CDC42YLR229C YAP7Q08182 245 aa4.69□□□□□ -1.66
CDC42YLR229C YOL075CQ08234 1294 aa4.69□□□□□ -1.66
CDC42YLR229C NEW1Q08972 1196 aaKnown RBP4.69□□□□□ -1.66
CDC42YLR229C ACM1Q08981 209 aa4.69□□□□□ -1.66
CDC42YLR229C RRP6Q12149 733 aaKnown RBP4.69□□□□□ -1.66
CDC42YLR229C YPL066WQ12194 479 aa4.69□□□□□ -1.66
CDC42YLR229C YVC1Q12324 675 aa4.69□□□□□ -1.66
CDC42YLR229C RPL11BQ3E757 174 aaPredicted RBP4.69□□□□□ -1.66
CDC42YLR229C MYO1P08964 1928 aa4.69□□□□□ -1.66
CDC42YLR229C ILV1P00927 576 aaKnown RBP4.68□□□□□ -1.66
CDC42YLR229C ADE8P04161 214 aa4.68□□□□□ -1.66
CDC42YLR229C KRS1P15180 591 aaKnown RBP4.68□□□□□ -1.66
CDC42YLR229C PRE10P21242 288 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
CDC42YLR229C SEC14P24280 304 aaKnown RBP4.68□□□□□ -1.66
CDC42YLR229C PPS1P38148 807 aa4.68□□□□□ -1.66
CDC42YLR229C PBP2P38151 413 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
CDC42YLR229C TDA3P38758 523 aa4.68□□□□□ -1.66
CDC42YLR229C NDT80P38830 627 aa4.68□□□□□ -1.66
CDC42YLR229C ACA1P39970 489 aa4.68□□□□□ -1.66
CDC42YLR229C NUP82P40368 713 aa4.68□□□□□ -1.66
CDC42YLR229C MIC19P43594 170 aa4.68□□□□□ -1.66
CDC42YLR229C BOP3P53958 396 aa4.68□□□□□ -1.66
CDC42YLR229C DUS3Q06053 668 aaKnown RBP4.68□□□□□ -1.66
CDC42YLR229C UBX5Q06682 500 aa4.68□□□□□ -1.66
CDC42YLR229C FMP25Q08023 583 aa4.68□□□□□ -1.66
CDC42YLR229C TRE1Q08919 783 aa4.68□□□□□ -1.66
CDC42YLR229C APL5Q08951 932 aaKnown RBP4.68□□□□□ -1.66
CDC42YLR229C YPL216WQ08964 1102 aa4.68□□□□□ -1.66
CDC42YLR229C YLR125WQ12138 136 aa4.68□□□□□ -1.66
CDC42YLR229C RIO1Q12196 484 aaKnown RBP4.68□□□□□ -1.66
CDC42YLR229C GSC2P40989 1895 aa4.67□□□□□ -1.66
CDC42YLR229C YMR085WP0CF18 432 aa4.67□□□□□ -1.66
CDC42YLR229C PRP16P15938 1071 aaPredicted RBP4.67□□□□□ -1.66
CDC42YLR229C RPC53P25441 422 aa4.67□□□□□ -1.66
CDC42YLR229C CDC60P26637 1090 aaKnown RBP4.67□□□□□ -1.66
CDC42YLR229C ECM32P32644 1121 aaKnown RBP4.67□□□□□ -1.66
CDC42YLR229C LOS1P33418 1100 aaPredicted RBP4.67□□□□□ -1.66
CDC42YLR229C RPC25P35718 212 aa4.67□□□□□ -1.66
CDC42YLR229C SIP3P38717 1229 aa4.67□□□□□ -1.66
CDC42YLR229C TAT2P38967 592 aa4.67□□□□□ -1.66
CDC42YLR229C PIK1P39104 1066 aa4.67□□□□□ -1.66
CDC42YLR229C SAH1P39954 449 aaKnown RBP4.67□□□□□ -1.66
CDC42YLR229C MXR1P40029 184 aa4.67□□□□□ -1.66
CDC42YLR229C VFA1P40080 203 aa4.67□□□□□ -1.66
CDC42YLR229C EFM4P40516 257 aa4.67□□□□□ -1.66
CDC42YLR229C TOS3P43637 560 aa4.67□□□□□ -1.66
CDC42YLR229C HFM1P51979 1187 aa4.67□□□□□ -1.66
CDC42YLR229C UTP8P53276 713 aaKnown RBP4.67□□□□□ -1.66
CDC42YLR229C RNH70P53331 553 aa4.67□□□□□ -1.66
CDC42YLR229C PGA2P53903 129 aa4.67□□□□□ -1.66
CDC42YLR229C ORC4P54791 529 aa4.67□□□□□ -1.66
CDC42YLR229C SEC5P89102 971 aa4.67□□□□□ -1.66
CDC42YLR229C EAR1Q03212 550 aa4.67□□□□□ -1.66
CDC42YLR229C FUS2Q05670 677 aa4.67□□□□□ -1.66
CDC42YLR229C YLR122CQ12312 125 aa4.67□□□□□ -1.66
CDC42YLR229C ARP6Q12509 438 aa4.67□□□□□ -1.66
CDC42YLR229C CYC7P00045 113 aa4.66□□□□□ -1.66
CDC42YLR229C RAD18P10862 487 aa4.66□□□□□ -1.66
CDC42YLR229C PMR1P13586 950 aa4.66□□□□□ -1.66
CDC42YLR229C PFK1P16861 987 aaKnown RBP4.66□□□□□ -1.66
CDC42YLR229C SPO12P17123 173 aa4.66□□□□□ -1.66
CDC42YLR229C PRO1P32264 428 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms