RNA–Protein interactions for RNA: YLR168C

UPS2, Transcript of Mitochondrial intermembrane space protein, yeast

Gene UPS2, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS2	YLR168C	IMA1	P53051	589 aa		4.91	□□□□□ -1.62
UPS2	YLR168C	CBK1	P53894	756 aa		4.91	□□□□□ -1.62
UPS2	YLR168C	ORC3	P54790	616 aa		4.91	□□□□□ -1.62
UPS2	YLR168C	RCR2	Q03446	210 aa	Known RBP	4.91	□□□□□ -1.62
UPS2	YLR168C	VIP1	Q06685	1146 aa	Known RBP	4.91	□□□□□ -1.62
UPS2	YLR168C	WHI4	Q07655	649 aa	Known RBP	4.91	□□□□□ -1.62
UPS2	YLR168C	SGO1	Q08490	590 aa		4.91	□□□□□ -1.62
UPS2	YLR168C	HOS1	Q12214	470 aa		4.91	□□□□□ -1.62
UPS2	YLR168C	ATG11	Q12527	1178 aa		4.91	□□□□□ -1.62
UPS2	YLR168C	URA3	P03962	267 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	FUM1	P08417	488 aa	Known RBP	4.9	□□□□□ -1.63
UPS2	YLR168C	CHS2	P14180	963 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	GUK1	P15454	187 aa	Known RBP	4.9	□□□□□ -1.63
UPS2	YLR168C	AAC3	P18238	307 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	COQ2	P32378	372 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	NUP120	P35729	1037 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	BIT61	P47041	543 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	RBG2	P53295	368 aa	Known RBP	4.9	□□□□□ -1.63
UPS2	YLR168C	VBA4	Q04602	768 aa	Known RBP	4.9	□□□□□ -1.63
UPS2	YLR168C	TRM8	Q12009	286 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	SCM3	Q12334	223 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	SWM1	Q12379	170 aa		4.9	□□□□□ -1.63
UPS2	YLR168C	CYC1	P00044	109 aa	Predicted RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	HIS5	P07172	385 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	ERG20	P08524	352 aa	Known RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	TUB3	P09734	445 aa	Known RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	CDC16	P09798	840 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	PRP4	P20053	465 aa	Known RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	PRE4	P30657	266 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	RMA1	P36001	430 aa	Known RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	IFA38	P38286	347 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	FSH1	P38777	243 aa	Known RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	PRM2	P40534	656 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	CHA4	P43634	648 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	TAH11	P47112	604 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	RRT6	P53117	311 aa	Predicted RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	SPO1	P53541	631 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	SQS1	P53866	767 aa	Known RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	YPL034W	Q03083	165 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	PKH1	Q03407	766 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	ARA2	Q04212	335 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	VPS36	Q06696	566 aa		4.89	□□□□□ -1.63
UPS2	YLR168C	SNU66	Q12420	587 aa	Predicted RBP	4.89	□□□□□ -1.63
UPS2	YLR168C	TUF1	P02992	437 aa	Known RBP	4.88	□□□□□ -1.63
UPS2	YLR168C	GCD1	P09032	578 aa	Predicted RBP	4.88	□□□□□ -1.63
UPS2	YLR168C	HMG2	P12684	1045 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
UPS2	YLR168C	BET2	P20133	325 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	SEC21	P32074	935 aa	Known RBP	4.88	□□□□□ -1.63
UPS2	YLR168C	TFC3	P34111	1160 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	YHR112C	P38716	378 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	MSS4	P38994	779 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	YEL068C	P39977	110 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	NCS6	P53088	359 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	YAP1802	P53309	568 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	TIM50	Q02776	476 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	YLR122C	Q12312	125 aa		4.88	□□□□□ -1.63
UPS2	YLR168C	ADE3	P07245	946 aa	Known RBP	4.87	□□□□□ -1.63
UPS2	YLR168C	ARG1	P22768	420 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	RIT1	P23796	513 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	SWI4	P25302	1093 aa	Known RBP	4.87	□□□□□ -1.63
UPS2	YLR168C	KIN82	P25341	720 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	PRP45	P28004	379 aa	Predicted RBP	4.87	□□□□□ -1.63
UPS2	YLR168C	RAD16	P31244	790 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	NPL6	P32832	435 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	TEF4	P36008	412 aa	Known RBP	4.87	□□□□□ -1.63
UPS2	YLR168C	NOP4	P37838	685 aa	Known RBP	4.87	□□□□□ -1.63
UPS2	YLR168C	UBS1	P38290	277 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	GSM1	P42950	618 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	BST1	P43571	1029 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	IRC6	P43615	237 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	NOP9	P47077	666 aa	Known RBP	4.87	□□□□□ -1.63
UPS2	YLR168C	PSP1	P50896	841 aa	Known RBP	4.87	□□□□□ -1.63
UPS2	YLR168C	ACS1	Q01574	713 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	YKU80	Q04437	629 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	TDA9	Q04545	1251 aa		4.87	□□□□□ -1.63
UPS2	YLR168C	GLT1	Q12680	2145 aa	Known RBP	4.87	□□□□□ -1.63
UPS2	YLR168C	PCK1	P10963	549 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	MET8	P15807	274 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	SET3	P36124	751 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	CDS1	P38221	457 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	YNL195C	P40168	261 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	CAB2	P40506	365 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	TEL2	P53038	688 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	COX18	P53239	316 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	MDR1	P53258	950 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	MRPL19	P53875	158 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	SNO4	Q04902	237 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	YLR287C	Q05881	355 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	SPN1	Q06505	410 aa	Predicted RBP	4.86	□□□□□ -1.63
UPS2	YLR168C	YCG1	Q06680	1035 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	HSP33	Q08914	237 aa	Known RBP	4.86	□□□□□ -1.63
UPS2	YLR168C	HSP32	Q08992	237 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	TAH18	Q12181	623 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	POM34	Q12445	299 aa		4.86	□□□□□ -1.63
UPS2	YLR168C	RVB2	Q12464	471 aa	Known RBP	4.86	□□□□□ -1.63
UPS2	YLR168C	RNR1	P21524	888 aa	Known RBP	4.85	□□□□□ -1.63
UPS2	YLR168C	ARP2	P32381	391 aa	Known RBP	4.85	□□□□□ -1.63
UPS2	YLR168C	CNS1	P33313	385 aa		4.85	□□□□□ -1.63
UPS2	YLR168C	YKL050C	P35736	922 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms