RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C SWI6P09959 803 aa4.39□□□□□ -1.71
SRP40YKR092C CLN1P20437 546 aa4.39□□□□□ -1.71
SRP40YKR092C SMY1P32364 656 aaKnown RBP4.39□□□□□ -1.71
SRP40YKR092C IME2P32581 645 aa4.39□□□□□ -1.71
SRP40YKR092C ANP1P32629 500 aa4.39□□□□□ -1.71
SRP40YKR092C GRX4P32642 244 aa4.39□□□□□ -1.71
SRP40YKR092C SEC6P32844 805 aa4.39□□□□□ -1.71
SRP40YKR092C JNM1P36224 373 aa4.39□□□□□ -1.71
SRP40YKR092C YBR259WP38338 688 aa4.39□□□□□ -1.71
SRP40YKR092C MIP6P38760 659 aaKnown RBP4.39□□□□□ -1.71
SRP40YKR092C PCL10P53124 433 aa4.39□□□□□ -1.71
SRP40YKR092C ERG5P54781 538 aa4.39□□□□□ -1.71
SRP40YKR092C CWC21Q03375 135 aaKnown RBP4.39□□□□□ -1.71
SRP40YKR092C MTQ2Q03920 221 aaPredicted RBP4.39□□□□□ -1.71
SRP40YKR092C ARR1Q06596 294 aa4.39□□□□□ -1.71
SRP40YKR092C RIX7Q07844 837 aaKnown RBP4.39□□□□□ -1.71
SRP40YKR092C BRR1Q99177 341 aaPredicted RBP4.39□□□□□ -1.71
SRP40YKR092C PDR12Q02785 1511 aa4.39□□□□□ -1.71
SRP40YKR092C NUP157P40064 1391 aaKnown RBP4.39□□□□□ -1.71
SRP40YKR092C TRP4P07285 380 aaPredicted RBP4.38□□□□□ -1.71
SRP40YKR092C APN1P22936 367 aa4.38□□□□□ -1.71
SRP40YKR092C KRR1P25586 316 aaPredicted RBP4.38□□□□□ -1.71
SRP40YKR092C TRM2P33753 639 aa4.38□□□□□ -1.71
SRP40YKR092C BFR1P38934 470 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SRP40YKR092C YEN1P40028 759 aa4.38□□□□□ -1.71
SRP40YKR092C FKH2P41813 862 aa4.38□□□□□ -1.71
SRP40YKR092C PRP31P49704 494 aaPredicted RBP4.38□□□□□ -1.71
SRP40YKR092C MRPS35P53292 345 aa4.38□□□□□ -1.71
SRP40YKR092C NRG1Q03125 231 aa4.38□□□□□ -1.71
SRP40YKR092C GIS1Q03833 894 aa4.38□□□□□ -1.71
SRP40YKR092C HFD1Q04458 532 aa4.38□□□□□ -1.71
SRP40YKR092C ERV41Q04651 352 aa4.38□□□□□ -1.71
SRP40YKR092C PHM6Q05637 104 aa4.38□□□□□ -1.71
SRP40YKR092C YLH47Q06493 454 aa4.38□□□□□ -1.71
SRP40YKR092C CDC45Q08032 650 aa4.38□□□□□ -1.71
SRP40YKR092C AIM39Q08223 395 aa4.38□□□□□ -1.71
SRP40YKR092C FAP7Q12055 197 aaPredicted RBP4.38□□□□□ -1.71
SRP40YKR092C NFI1Q12216 726 aa4.38□□□□□ -1.71
SRP40YKR092C NTO1Q12311 748 aa4.38□□□□□ -1.71
SRP40YKR092C RTP1Q12751 981 aa4.38□□□□□ -1.71
SRP40YKR092C RPO21P04050 1733 aaKnown RBP4.38□□□□□ -1.71
SRP40YKR092C YSP2Q06681 1438 aa4.38□□□□□ -1.71
SRP40YKR092C HRR25P29295 494 aaKnown RBP4.37□□□□□ -1.71
SRP40YKR092C YKL100CP34248 587 aa4.37□□□□□ -1.71
SRP40YKR092C RRN3P36070 627 aa4.37□□□□□ -1.71
SRP40YKR092C UTP18P40362 594 aaPredicted RBP4.37□□□□□ -1.71
SRP40YKR092C GPG1P53130 126 aa4.37□□□□□ -1.71
SRP40YKR092C EAF7P53911 425 aaKnown RBP4.37□□□□□ -1.71
SRP40YKR092C PCL8Q08966 492 aa4.37□□□□□ -1.71
SRP40YKR092C LTE1P07866 1435 aa4.37□□□□□ -1.71
SRP40YKR092C EFT1P32324 842 aaKnown RBP4.36□□□□□ -1.71
SRP40YKR092C KDX1P36005 433 aa4.36□□□□□ -1.71
SRP40YKR092C OPY1P38271 328 aa4.36□□□□□ -1.71
SRP40YKR092C SIC1P38634 284 aa4.36□□□□□ -1.71
SRP40YKR092C TDA3P38758 523 aa4.36□□□□□ -1.71
SRP40YKR092C RRP8P38961 392 aaKnown RBP4.36□□□□□ -1.71
SRP40YKR092C RET2P43621 546 aa4.36□□□□□ -1.71
SRP40YKR092C SRB7P47822 140 aa4.36□□□□□ -1.71
SRP40YKR092C ARP4P80428 489 aa4.36□□□□□ -1.71
SRP40YKR092C GPD1Q00055 391 aaKnown RBP4.36□□□□□ -1.71
SRP40YKR092C DLT1Q04216 342 aa4.36□□□□□ -1.71
SRP40YKR092C YTM1Q12024 460 aaPredicted RBP4.36□□□□□ -1.71
SRP40YKR092C PUS9Q12069 462 aa4.36□□□□□ -1.71
SRP40YKR092C DBP10Q12389 995 aaKnown RBP4.36□□□□□ -1.71
SRP40YKR092C APC2Q12440 853 aa4.36□□□□□ -1.71
SRP40YKR092C RTC1Q08281 1341 aa4.36□□□□□ -1.71
SRP40YKR092C RAV1P47104 1357 aa4.36□□□□□ -1.71
SRP40YKR092C MET3P08536 511 aa4.35□□□□□ -1.71
SRP40YKR092C RED1P14291 827 aa4.35□□□□□ -1.71
SRP40YKR092C ADE2P21264 571 aaKnown RBP4.35□□□□□ -1.71
SRP40YKR092C TRX2P22803 104 aaKnown RBP4.35□□□□□ -1.71
SRP40YKR092C ERG4P25340 473 aa4.35□□□□□ -1.71
SRP40YKR092C COY1P34237 679 aa4.35□□□□□ -1.71
SRP40YKR092C CCL1P37366 393 aa4.35□□□□□ -1.71
SRP40YKR092C GRX7P38068 203 aa4.35□□□□□ -1.71
SRP40YKR092C TAF5P38129 798 aa4.35□□□□□ -1.71
SRP40YKR092C FUI1P38196 639 aa4.35□□□□□ -1.71
SRP40YKR092C SSZ1P38788 538 aaKnown RBP4.35□□□□□ -1.71
SRP40YKR092C DSN1P40568 576 aa4.35□□□□□ -1.71
SRP40YKR092C GPP1P41277 250 aaKnown RBP4.35□□□□□ -1.71
SRP40YKR092C GZF3P42944 551 aaKnown RBP4.35□□□□□ -1.71
SRP40YKR092C MSE1P48525 536 aa4.35□□□□□ -1.71
SRP40YKR092C ARG5,6Q01217 863 aa4.35□□□□□ -1.71
SRP40YKR092C VTI1Q04338 217 aa4.35□□□□□ -1.71
SRP40YKR092C GRC3Q07845 632 aa4.35□□□□□ -1.71
SRP40YKR092C NAT1P12945 854 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C CAF20P12962 161 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C YEF3P16521 1044 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C RPB4P20433 221 aaPredicted RBP4.34□□□□□ -1.71
SRP40YKR092C PMI40P29952 429 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C ZUO1P32527 433 aaKnown RBP4.34□□□□□ -1.71
SRP40YKR092C SKI2P35207 1287 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SRP40YKR092C ESL2P36168 1195 aa4.34□□□□□ -1.71
SRP40YKR092C APT2P36973 181 aa4.34□□□□□ -1.71
SRP40YKR092C KTR4P38131 464 aa4.34□□□□□ -1.71
SRP40YKR092C RKM3P38222 552 aa4.34□□□□□ -1.71
SRP40YKR092C EXO84P38261 753 aa4.34□□□□□ -1.71
SRP40YKR092C APE4P38821 490 aa4.34□□□□□ -1.71
SRP40YKR092C CAJ1P39101 391 aa4.34□□□□□ -1.71
SRP40YKR092C ECM1P39715 212 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms