RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W PES4P39684 611 aa2.29□□□□□ -2.04
RTT107YHR154W SCS2P40075 244 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W SGM1P47166 707 aa2.29□□□□□ -2.04
RTT107YHR154W VPS62P53285 467 aa2.29□□□□□ -2.04
RTT107YHR154W GYL1Q04322 720 aa2.29□□□□□ -2.04
RTT107YHR154W MFB1Q04922 465 aa2.29□□□□□ -2.04
RTT107YHR154W RPN7Q06103 429 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W DBP10Q12389 995 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W NSI1Q12457 570 aa2.29□□□□□ -2.04
RTT107YHR154W NAT1P12945 854 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W SPO16P17122 198 aa2.29□□□□□ -2.04
RTT107YHR154W DGR2P32330 852 aa2.29□□□□□ -2.04
RTT107YHR154W RRP8P38961 392 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W PNT1P38969 423 aa2.29□□□□□ -2.04
RTT107YHR154W DUN1P39009 513 aa2.29□□□□□ -2.04
RTT107YHR154W EAF5P39995 279 aa2.29□□□□□ -2.04
RTT107YHR154W CIR1P42940 261 aa2.29□□□□□ -2.04
RTT107YHR154W MAD3P47074 515 aa2.29□□□□□ -2.04
RTT107YHR154W YGR016WP53209 190 aa2.29□□□□□ -2.04
RTT107YHR154W SOK2P53438 785 aaPredicted RBP2.29□□□□□ -2.04
RTT107YHR154W ELA1P53861 379 aaPredicted RBP2.29□□□□□ -2.04
RTT107YHR154W TAP42Q04372 366 aa2.29□□□□□ -2.04
RTT107YHR154W GSF2Q04697 403 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W YDR286CQ05530 114 aa2.29□□□□□ -2.04
RTT107YHR154W Q0142Q9ZZW4 58 aa2.29□□□□□ -2.04
RTT107YHR154W MNE1P24720 663 aa2.28□□□□□ -2.04
RTT107YHR154W TEF4P36008 412 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W DHR2P36009 735 aaPredicted RBP2.28□□□□□ -2.04
RTT107YHR154W POA1P38218 177 aa2.28□□□□□ -2.04
RTT107YHR154W YEL025CP39991 1188 aa2.28□□□□□ -2.04
RTT107YHR154W YER158CP40095 573 aa2.28□□□□□ -2.04
RTT107YHR154W INP51P40559 946 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W VPS4P52917 437 aa2.28□□□□□ -2.04
RTT107YHR154W YMR155WQ03795 547 aa2.28□□□□□ -2.04
RTT107YHR154W MDM38Q08179 573 aa2.28□□□□□ -2.04
RTT107YHR154W HUA2Q12134 243 aa2.28□□□□□ -2.04
RTT107YHR154W TY1A-DR3Q12441 440 aa2.28□□□□□ -2.04
RTT107YHR154W SKM1Q12469 655 aa2.28□□□□□ -2.04
RTT107YHR154W FLO1P32768 1537 aa2.28□□□□□ -2.04
RTT107YHR154W TY1B-AO13527 1196 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W RPL11AP0C0W9 174 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W GFA1P14742 717 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W HSP104P31539 908 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W SLA1P32790 1244 aa2.28□□□□□ -2.04
RTT107YHR154W AFG2P32794 780 aa2.28□□□□□ -2.04
RTT107YHR154W RMA1P36001 430 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W PGM2P37012 569 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W YHR131CP38835 850 aa2.28□□□□□ -2.04
RTT107YHR154W SIT1P39980 628 aa2.28□□□□□ -2.04
RTT107YHR154W JEM1P40358 645 aa2.28□□□□□ -2.04
RTT107YHR154W DPH1P40487 425 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W RLP7P40693 322 aaKnown RBP2.28□□□□□ -2.04
RTT107YHR154W ARF3P40994 183 aaRIP-Chip data2.28□□□□□ -2.04 RIP-Chip
RTT107YHR154W YJL055WP47044 245 aa2.28□□□□□ -2.04
RTT107YHR154W YNR065CP53751 1116 aa2.28□□□□□ -2.04
RTT107YHR154W CEG1Q01159 459 aaPredicted RBP2.28□□□□□ -2.04
RTT107YHR154W ATP25Q03153 612 aa2.28□□□□□ -2.04
RTT107YHR154W ENV7Q12003 364 aa2.28□□□□□ -2.04
RTT107YHR154W RPL11BQ3E757 174 aaPredicted RBP2.28□□□□□ -2.04
RTT107YHR154W PHO5P00635 467 aa2.27□□□□□ -2.05
RTT107YHR154W CBP1P07252 654 aa2.27□□□□□ -2.05
RTT107YHR154W GLK1P17709 500 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W YCL002CP25565 263 aa2.27□□□□□ -2.05
RTT107YHR154W PET309P32522 965 aaPredicted RBP2.27□□□□□ -2.05
RTT107YHR154W TGL1P34163 548 aa2.27□□□□□ -2.05
RTT107YHR154W CCT5P40413 562 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W ART5P53244 586 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W ZDS2P54786 942 aa2.27□□□□□ -2.05
RTT107YHR154W SEC5P89102 971 aa2.27□□□□□ -2.05
RTT107YHR154W LRS4Q04087 347 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W ARP9Q05123 467 aa2.27□□□□□ -2.05
RTT107YHR154W HRQ1Q05549 1077 aa2.27□□□□□ -2.05
RTT107YHR154W TY3A-GQ12173 290 aa2.27□□□□□ -2.05
RTT107YHR154W AHC1Q12433 566 aa2.27□□□□□ -2.05
RTT107YHR154W TY3A-IQ99219 290 aa2.27□□□□□ -2.05
RTT107YHR154W TUS1Q06412 1307 aa2.27□□□□□ -2.05
RTT107YHR154W MIS1P09440 975 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W GLN4P13188 809 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W PDC5P16467 563 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W DBP2P24783 546 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W AAD3P25612 363 aa2.27□□□□□ -2.05
RTT107YHR154W IMP2'P32351 346 aa2.27□□□□□ -2.05
RTT107YHR154W NGG1P32494 702 aa2.27□□□□□ -2.05
RTT107YHR154W FRD1P32614 470 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W OAF3P36023 863 aa2.27□□□□□ -2.05
RTT107YHR154W FAT1P38225 669 aa2.27□□□□□ -2.05
RTT107YHR154W YHR202WP38887 602 aa2.27□□□□□ -2.05
RTT107YHR154W AXL2P38928 823 aa2.27□□□□□ -2.05
RTT107YHR154W PSP2P50109 593 aaKnown RBP2.27□□□□□ -2.05
RTT107YHR154W MDR1P53258 950 aa2.27□□□□□ -2.05
RTT107YHR154W SFB2P53953 876 aa2.27□□□□□ -2.05
RTT107YHR154W YPL071CQ02864 156 aa2.27□□□□□ -2.05
RTT107YHR154W YOR022CQ12204 715 aa2.27□□□□□ -2.05
RTT107YHR154W ARP7Q12406 477 aa2.27□□□□□ -2.05
RTT107YHR154W TOR1P35169 2470 aa2.27□□□□□ -2.05
RTT107YHR154W TOM1Q03280 3268 aa2.27□□□□□ -2.05
RTT107YHR154W AUS1Q08409 1394 aa2.27□□□□□ -2.05
RTT107YHR154W MET17P06106 444 aa2.27□□□□□ -2.05
RTT107YHR154W CBP3P21560 335 aa2.27□□□□□ -2.05
RTT107YHR154W CDC12P32468 407 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms