RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	BRO1	P48582	844 aa		4.62	□□□□□ -1.67
XKS1	YGR194C	UBA2	P52488	636 aa		4.62	□□□□□ -1.67
XKS1	YGR194C	TOF1	P53840	1238 aa		4.62	□□□□□ -1.67
XKS1	YGR194C	YML119W	Q03208	357 aa		4.62	□□□□□ -1.67
XKS1	YGR194C	VPS16	Q03308	798 aa		4.62	□□□□□ -1.67
XKS1	YGR194C	YDL177C	Q12257	170 aa		4.62	□□□□□ -1.67
XKS1	YGR194C	RIB2	Q12362	591 aa	Known RBP	4.62	□□□□□ -1.67
XKS1	YGR194C	ALG1	P16661	449 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	ILV6	P25605	309 aa	Known RBP	4.61	□□□□□ -1.67
XKS1	YGR194C	TOM71	P38825	639 aa	Known RBP	4.61	□□□□□ -1.67
XKS1	YGR194C	LIN1	P38852	340 aa	Predicted RBP	4.61	□□□□□ -1.67
XKS1	YGR194C	NIT1	P40447	199 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	SAP185	P40856	1058 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	TDA10	P42938	290 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	PCL10	P53124	433 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	MDR1	P53258	950 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	SFB2	P53953	876 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	EEB1	Q02891	456 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	PRP42	Q03776	544 aa	Known RBP	4.61	□□□□□ -1.67
XKS1	YGR194C	SIL1	Q08199	421 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	NBA1	Q08229	501 aa	Known RBP	4.61	□□□□□ -1.67
XKS1	YGR194C	OSW1	Q08692	278 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	NCA2	Q12374	616 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	YOR111W	Q99210	232 aa		4.61	□□□□□ -1.67
XKS1	YGR194C	UTP10	P42945	1769 aa	Known RBP	4.61	□□□□□ -1.67
XKS1	YGR194C	SRV2	P17555	526 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	PRP9	P19736	530 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	RPC53	P25441	422 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	MVD1	P32377	396 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	ANP1	P32629	500 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	SEC66	P33754	206 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	ECM4	P36156	370 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	CCZ1	P38273	704 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	RTS1	P38903	757 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	PIK1	P39104	1066 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	SIT1	P39980	628 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	VID27	P40157	782 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	CSM2	P40465	213 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	AXL1	P40851	1208 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	YFL054C	P43549	646 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	VTC2	P43585	828 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	KAP114	P53067	1004 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	SDA1	P53313	767 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
XKS1	YGR194C	DIG1	Q03063	452 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	ATP25	Q03153	612 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	HFD1	Q04458	532 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	YDR341C	Q05506	607 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	SMD2	Q06217	110 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	CDA2	Q06703	312 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	ABP140	Q08641	628 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	ADR1	P07248	1323 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	SSB1	P11484	613 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	TUP1	P16649	713 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	GAS1	P22146	559 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	ETP1	P38748	585 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	TDA11	P38854	504 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	SSB2	P40150	613 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	AIM20	P40451	204 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	IAH1	P41734	238 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	IOC3	P43596	787 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	ALG2	P43636	503 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	HOP2	P53187	214 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	UTP14	Q04500	899 aa	Known RBP	4.6	□□□□□ -1.67
XKS1	YGR194C	YPR078C	Q06813	372 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	AIM41	Q12032	185 aa		4.6	□□□□□ -1.67
XKS1	YGR194C	TRP2	P00899	507 aa	Known RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	ADH4	P10127	382 aa		4.59	□□□□□ -1.67
XKS1	YGR194C	TAL1	P15019	335 aa	Known RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	TYR1	P20049	452 aa		4.59	□□□□□ -1.67
XKS1	YGR194C	RNR3	P21672	869 aa	Known RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
XKS1	YGR194C	EFB1	P32471	206 aa	Known RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	LYP1	P32487	611 aa		4.59	□□□□□ -1.67
XKS1	YGR194C	SER1	P33330	395 aa	Known RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	SMX2	P40204	77 aa	Known RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	TOS3	P43637	560 aa		4.59	□□□□□ -1.67
XKS1	YGR194C	HNT2	P49775	206 aa		4.59	□□□□□ -1.67
XKS1	YGR194C	JJJ1	P53863	590 aa		4.59	□□□□□ -1.67
XKS1	YGR194C	SHE9	Q04172	456 aa		4.59	□□□□□ -1.67
XKS1	YGR194C	INM2	Q05533	292 aa		4.59	□□□□□ -1.67
XKS1	YGR194C	YSH1	Q06224	779 aa	Predicted RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	TSR1	Q07381	788 aa	Known RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	GPN2	Q08726	347 aa	Predicted RBP	4.59	□□□□□ -1.67
XKS1	YGR194C	POM152	P39685	1337 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	CIT1	P00890	479 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	SPS1	P08458	490 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	NUC1	P08466	329 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	ERG11	P10614	530 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
XKS1	YGR194C	THR4	P16120	514 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	SIN4	P32259	974 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	SMY1	P32364	656 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	NIP1	P32497	812 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	CBF2	P32504	956 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	KAR9	P32526	644 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	LHS1	P36016	881 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	RPC37	P36121	282 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	PET10	P36139	283 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	YIR042C	P40586	236 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms