RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W PNP1Q05788 311 aa8.18□□□□□ -1.1
SHC1YER096W SFH1Q06168 426 aa8.18□□□□□ -1.1
SHC1YER096W DDC1Q08949 612 aa8.18□□□□□ -1.1
SHC1YER096W GPM2Q12008 311 aa8.18□□□□□ -1.1
SHC1YER096W RIO1Q12196 484 aaKnown RBP8.18□□□□□ -1.1
SHC1YER096W PRC1P00729 532 aa8.17□□□□□ -1.1
SHC1YER096W TUB3P09734 445 aaKnown RBP8.17□□□□□ -1.1
SHC1YER096W PYC1P11154 1178 aaKnown RBP8.17□□□□□ -1.1
SHC1YER096W PMS1P14242 873 aa8.17□□□□□ -1.1
SHC1YER096W MSD1P15179 658 aaKnown RBP8.17□□□□□ -1.1
SHC1YER096W TKL2P33315 681 aa8.17□□□□□ -1.1
SHC1YER096W KDX1P36005 433 aa8.17□□□□□ -1.1
SHC1YER096W APN2P38207 520 aa8.17□□□□□ -1.1
SHC1YER096W VHC1P38329 1120 aa8.17□□□□□ -1.1
SHC1YER096W SAK1P38990 1142 aa8.17□□□□□ -1.1
SHC1YER096W FLC2P39719 783 aa8.17□□□□□ -1.1
SHC1YER096W ARG2P40360 574 aa8.17□□□□□ -1.1
SHC1YER096W YFL052WP43551 465 aa8.17□□□□□ -1.1
SHC1YER096W YML6P51998 286 aa8.17□□□□□ -1.1
SHC1YER096W BET4Q00618 327 aa8.17□□□□□ -1.1
SHC1YER096W PRM6Q04705 352 aa8.17□□□□□ -1.1
SHC1YER096W THI7Q05998 598 aa8.17□□□□□ -1.1
SHC1YER096W SAM3Q08986 587 aa8.17□□□□□ -1.1
SHC1YER096W ARG4P04076 463 aaPredicted RBP8.16□□□□□ -1.1
SHC1YER096W RAD1P06777 1100 aa8.16□□□□□ -1.1
SHC1YER096W CBF1P17106 351 aa8.16□□□□□ -1.1
SHC1YER096W MEI4P29467 408 aa8.16□□□□□ -1.1
SHC1YER096W PLC1P32383 869 aa8.16□□□□□ -1.1
SHC1YER096W AIM26P32858 118 aa8.16□□□□□ -1.1
SHC1YER096W MUD2P36084 527 aaKnown RBP8.16□□□□□ -1.1
SHC1YER096W MRPL7P36519 292 aa8.16□□□□□ -1.1
SHC1YER096W MAF1P41910 395 aa8.16□□□□□ -1.1
SHC1YER096W SCY1P53009 804 aa8.16□□□□□ -1.1
SHC1YER096W INA17Q02888 182 aa8.16□□□□□ -1.1
SHC1YER096W SKY1Q03656 742 aa8.16□□□□□ -1.1
SHC1YER096W TAF9Q05027 157 aa8.16□□□□□ -1.1
SHC1YER096W HRD3Q05787 833 aa8.16□□□□□ -1.1
SHC1YER096W HRT3Q12347 344 aa8.16□□□□□ -1.1
SHC1YER096W VPS5Q92331 675 aa8.16□□□□□ -1.1
SHC1YER096W YML002WP0CF17 737 aa8.15□□□□□ -1.1
SHC1YER096W PDR1P12383 1068 aa8.15□□□□□ -1.1
SHC1YER096W SHE3P38272 425 aaKnown RBP8.15□□□□□ -1.1
SHC1YER096W SPP381P38282 291 aaPredicted RBP8.15□□□□□ -1.1
SHC1YER096W CDC1P40986 491 aa8.15□□□□□ -1.1
SHC1YER096W YFL040WP43562 540 aa8.15□□□□□ -1.1
SHC1YER096W NUT1P53114 1132 aa8.15□□□□□ -1.1
SHC1YER096W YNL144CP53907 740 aa8.15□□□□□ -1.1
SHC1YER096W EMI2Q04409 500 aaKnown RBP8.15□□□□□ -1.1
SHC1YER096W NBP2Q12163 236 aa8.15□□□□□ -1.1
SHC1YER096W GCR1P07261 785 aa8.14□□□□□ -1.11
SHC1YER096W PEP5P12868 1029 aa8.14□□□□□ -1.11
SHC1YER096W TPS2P31688 896 aaKnown RBP8.14□□□□□ -1.11
SHC1YER096W UBC6P33296 250 aaPredicted RBP8.14□□□□□ -1.11
SHC1YER096W DUG2P38149 878 aa8.14□□□□□ -1.11
SHC1YER096W RAD55P38953 406 aa8.14□□□□□ -1.11
SHC1YER096W LYS9P38999 446 aa8.14□□□□□ -1.11
SHC1YER096W FHL1P39521 936 aa8.14□□□□□ -1.11
SHC1YER096W ERP2P39704 215 aa8.14□□□□□ -1.11
SHC1YER096W TCB2P48231 1178 aa8.14□□□□□ -1.11
SHC1YER096W NMA111P53920 997 aa8.14□□□□□ -1.11
SHC1YER096W ADA2Q02336 434 aa8.14□□□□□ -1.11
SHC1YER096W FAP7Q12055 197 aaPredicted RBP8.14□□□□□ -1.11
SHC1YER096W IZH4Q99393 312 aa8.14□□□□□ -1.11
SHC1YER096W PAB1P04147 577 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
SHC1YER096W SLY1P22213 666 aa8.13□□□□□ -1.11
SHC1YER096W NFU1P32860 256 aa8.13□□□□□ -1.11
SHC1YER096W OLA1P38219 394 aaKnown RBP8.13□□□□□ -1.11
SHC1YER096W YBR053CP38235 358 aa8.13□□□□□ -1.11
SHC1YER096W RRT5P43607 289 aa8.13□□□□□ -1.11
SHC1YER096W CTK3P46963 296 aaPredicted RBP8.13□□□□□ -1.11
SHC1YER096W RKM2Q03942 479 aa8.13□□□□□ -1.11
SHC1YER096W THI20Q08224 551 aa8.13□□□□□ -1.11
SHC1YER096W MPC54Q08550 464 aa8.13□□□□□ -1.11
SHC1YER096W LEA1Q08963 238 aaPredicted RBP8.13□□□□□ -1.11
SHC1YER096W THI21Q08975 551 aa8.13□□□□□ -1.11
SHC1YER096W YOR223WQ12015 292 aa8.13□□□□□ -1.11
SHC1YER096W RRD2Q12461 358 aa8.13□□□□□ -1.11
SHC1YER096W TAO3P40468 2376 aa8.13□□□□□ -1.11
SHC1YER096W CDC24P11433 854 aaPredicted RBP8.13□□□□□ -1.11
SHC1YER096W YPK1P12688 680 aaKnown RBP8.13□□□□□ -1.11
SHC1YER096W PTC3P34221 468 aaKnown RBP8.13□□□□□ -1.11
SHC1YER096W WHI3P34761 661 aaKnown RBP8.13□□□□□ -1.11
SHC1YER096W CIN4P39110 191 aa8.13□□□□□ -1.11
SHC1YER096W JHD1P40034 492 aa8.13□□□□□ -1.11
SHC1YER096W TGL3P40308 642 aa8.13□□□□□ -1.11
SHC1YER096W YIR016WP40572 265 aa8.13□□□□□ -1.11
SHC1YER096W GUF1P46943 645 aa8.13□□□□□ -1.11
SHC1YER096W YJR039WP47107 1121 aa8.13□□□□□ -1.11
SHC1YER096W YNL108CP53929 270 aa8.13□□□□□ -1.11
SHC1YER096W KTR6P54070 446 aa8.13□□□□□ -1.11
SHC1YER096W RPL22BP56628 122 aaKnown RBP8.13□□□□□ -1.11
SHC1YER096W PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
SHC1YER096W HEM15P16622 393 aa8.12□□□□□ -1.11
SHC1YER096W MGT1P26188 188 aa8.12□□□□□ -1.11
SHC1YER096W DSS4P32601 143 aa8.12□□□□□ -1.11
SHC1YER096W RGD1P38339 666 aa8.12□□□□□ -1.11
SHC1YER096W SMX2P40204 77 aaKnown RBP8.12□□□□□ -1.11
SHC1YER096W FAF1P40546 346 aaPredicted RBP8.12□□□□□ -1.11
SHC1YER096W SAP185P40856 1058 aa8.12□□□□□ -1.11
SHC1YER096W YJR079WP47126 109 aa8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms