RNA–Protein interactions for RNA: YDR496C

PUF6, Transcript of Pumilio-homology domain protein, yeast

Gene PUF6, Length 1,971 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUF6	YDR496C	MLH2	Q07980	695 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	APL4	Q12028	832 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	PDR12	Q02785	1511 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	MLP2	P40457	1679 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	SNF5	P18480	905 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	RER1	P25560	188 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	CDC48	P25694	835 aa	Known RBP	3.14	□□□□□ -1.91
PUF6	YDR496C	DBF4	P32325	704 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	BET3	P36149	193 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	YJL070C	P40361	888 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	YJL055W	P47044	245 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	GPG1	P53130	126 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	RBG2	P53295	368 aa	Known RBP	3.14	□□□□□ -1.91
PUF6	YDR496C	YNL193W	P53870	558 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	MRPL22	P53881	309 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	ARP9	Q05123	467 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	BRR1	Q99177	341 aa	Predicted RBP	3.14	□□□□□ -1.91
PUF6	YDR496C	BUD3	P25558	1636 aa		3.14	□□□□□ -1.91
PUF6	YDR496C	SWI6	P09959	803 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	KSS1	P14681	368 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	PRP9	P19736	530 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	RPN2	P32565	945 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	SSE1	P32589	693 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	SLA2	P33338	968 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	SMC2	P38989	1170 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	ALD5	P40047	520 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	EPL1	P43572	832 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
PUF6	YDR496C	TRF5	P48561	642 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	PBP1	P53297	722 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	MEP3	P53390	489 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	SNO2	P53823	222 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	MRPL19	P53875	158 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	FDC1	Q03034	503 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	PRP42	Q03776	544 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	SYF1	Q04048	859 aa	Predicted RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	HFD1	Q04458	532 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	TDA9	Q04545	1251 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	YDR306C	Q06640	478 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	CUE5	Q08412	411 aa	Known RBP	3.13	□□□□□ -1.91
PUF6	YDR496C	TAH18	Q12181	623 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	PDR10	P51533	1564 aa		3.13	□□□□□ -1.91
PUF6	YDR496C	IQG1	Q12280	1495 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	CTT1	P06115	562 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	PRP6	P19735	899 aa	Predicted RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	KCC4	P25389	1037 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	ACP1	P32463	125 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	PPQ1	P32945	549 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	TEF4	P36008	412 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	YKL151C	P36059	337 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	KTR4	P38131	464 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	EFM2	P38347	419 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	PIH1	P38768	344 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	VPS45	P38932	577 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	PIK1	P39104	1066 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	ACA1	P39970	489 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	GPP2	P40106	250 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	HIS6	P40545	261 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	MDE1	P47095	244 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	ENP2	P48234	707 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	YGR153W	P48238	217 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	VPS9	P54787	451 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	SNP1	Q00916	300 aa	Predicted RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	RIP-Chip
PUF6	YDR496C	TAF11	Q04226	346 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	HBN1	Q96VH4	193 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	TOP3	P13099	656 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	OM45	P16547	393 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	PHO81	P17442	1178 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	SAN1	P22470	610 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	LCB1	P25045	558 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	CMK1	P27466	446 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	FUN30	P31380	1131 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	DPH5	P32469	300 aa	Predicted RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	PET309	P32522	965 aa	Predicted RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	YBR284W	P38150	797 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	SLX1	P38324	304 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	DED81	P38707	554 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	FTR1	P40088	404 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	AXL1	P40851	1208 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	CCT7	P42943	550 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	LSB1	P53281	241 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	JJJ1	P53863	590 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	TRS130	Q03660	1102 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	YKU80	Q04437	629 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	DPB4	Q04603	196 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	RRN11	Q04712	507 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	HRQ1	Q05549	1077 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	DUS3	Q06053	668 aa	Known RBP	3.12	□□□□□ -1.91
PUF6	YDR496C	PHO92	Q06390	306 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	RSB1	Q08417	382 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	ACM1	Q08981	209 aa		3.12	□□□□□ -1.91
PUF6	YDR496C	GDB1	Q06625	1536 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	ADE8	P04161	214 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	PRP28	P23394	588 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	RPC53	P25441	422 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	RME1	P32338	300 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	HIR2	P32480	875 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	KRE6	P32486	720 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	BEM3	P32873	1128 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms