RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W FDC1Q03034 503 aa2.85□□□□□ -1.95
VPS52YDR484W COX11P19516 300 aaKnown RBP2.84□□□□□ -1.95
VPS52YDR484W KCC4P25389 1037 aa2.84□□□□□ -1.95
VPS52YDR484W SET3P36124 751 aa2.84□□□□□ -1.95
VPS52YDR484W SRP68P38687 599 aaKnown RBP2.84□□□□□ -1.95
VPS52YDR484W YHR033WP38690 423 aa2.84□□□□□ -1.95
VPS52YDR484W PEA2P40091 420 aa2.84□□□□□ -1.95
VPS52YDR484W PRM2P40534 656 aa2.84□□□□□ -1.95
VPS52YDR484W YJR120WP47157 116 aa2.84□□□□□ -1.95
VPS52YDR484W VPS73P53142 486 aaKnown RBP2.84□□□□□ -1.95
VPS52YDR484W HLR1Q04429 423 aa2.84□□□□□ -1.95
VPS52YDR484W BMS1Q08965 1183 aaKnown RBP2.84□□□□□ -1.95
VPS52YDR484W AIM41Q12032 185 aa2.84□□□□□ -1.95
VPS52YDR484W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
VPS52YDR484W KAR1P11927 433 aa2.83□□□□□ -1.96
VPS52YDR484W MSS1P32559 526 aaPredicted RBP2.83□□□□□ -1.96
VPS52YDR484W TMT1P32643 299 aa2.83□□□□□ -1.96
VPS52YDR484W SER1P33330 395 aaKnown RBP2.83□□□□□ -1.96
VPS52YDR484W TDP1P38319 544 aa2.83□□□□□ -1.96
VPS52YDR484W KSP1P38691 1029 aaKnown RBP2.83□□□□□ -1.96
VPS52YDR484W CCT7P42943 550 aaKnown RBP2.83□□□□□ -1.96
VPS52YDR484W SPC98P53540 846 aa2.83□□□□□ -1.96
VPS52YDR484W COG6P53959 839 aa2.83□□□□□ -1.96
VPS52YDR484W CEF1Q03654 590 aaPredicted RBP2.83□□□□□ -1.96
VPS52YDR484W NGL1Q08213 363 aaKnown RBP2.83□□□□□ -1.96
VPS52YDR484W RPN13O13563 156 aa2.83□□□□□ -1.96
VPS52YDR484W TUF1P02992 437 aaKnown RBP2.83□□□□□ -1.96
VPS52YDR484W HXT4P32467 576 aa2.83□□□□□ -1.96
VPS52YDR484W UBS1P38290 277 aa2.83□□□□□ -1.96
VPS52YDR484W YHR097CP38809 366 aaKnown RBP2.83□□□□□ -1.96
VPS52YDR484W FTR1P40088 404 aa2.83□□□□□ -1.96
VPS52YDR484W YIL166CP40445 542 aa2.83□□□□□ -1.96
VPS52YDR484W PEX14P53112 341 aa2.83□□□□□ -1.96
VPS52YDR484W DIP5P53388 608 aa2.83□□□□□ -1.96
VPS52YDR484W FOL1P53848 824 aa2.83□□□□□ -1.96
VPS52YDR484W SEC5P89102 971 aa2.83□□□□□ -1.96
VPS52YDR484W IZH3Q07959 543 aa2.83□□□□□ -1.96
VPS52YDR484W PEX15Q08215 383 aa2.83□□□□□ -1.96
VPS52YDR484W ATP12P22135 325 aa2.82□□□□□ -1.96
VPS52YDR484W HEM12P32347 362 aaPredicted RBP2.82□□□□□ -1.96
VPS52YDR484W CRG1P38892 291 aaRIP-Chip data2.82□□□□□ -1.96not detected
VPS52YDR484W TMN3P40071 706 aa2.82□□□□□ -1.96
VPS52YDR484W THI6P41835 540 aa2.82□□□□□ -1.96
VPS52YDR484W NMA2P53204 395 aa2.82□□□□□ -1.96
VPS52YDR484W HOL1P53389 586 aa2.82□□□□□ -1.96
VPS52YDR484W SQS1P53866 767 aaKnown RBP2.82□□□□□ -1.96
VPS52YDR484W DAK1P54838 584 aaKnown RBP2.82□□□□□ -1.96
VPS52YDR484W UFO1Q04511 668 aa2.82□□□□□ -1.96
VPS52YDR484W RKI1Q12189 258 aa2.82□□□□□ -1.96
VPS52YDR484W DHR2P36009 735 aaPredicted RBP2.81□□□□□ -1.96
VPS52YDR484W ELF1P36053 145 aa2.81□□□□□ -1.96
VPS52YDR484W CDS1P38221 457 aa2.81□□□□□ -1.96
VPS52YDR484W YEL025CP39991 1188 aa2.81□□□□□ -1.96
VPS52YDR484W TAH11P47112 604 aa2.81□□□□□ -1.96
VPS52YDR484W GLO1P50107 326 aa2.81□□□□□ -1.96
VPS52YDR484W APM1Q00776 475 aaPredicted RBP2.81□□□□□ -1.96
VPS52YDR484W YCG1Q06680 1035 aa2.81□□□□□ -1.96
VPS52YDR484W LAM4P38800 1345 aa2.81□□□□□ -1.96
VPS52YDR484W YEL076C-AP0CX16 216 aa2.81□□□□□ -1.96
VPS52YDR484W YLR464WP0CX17 216 aa2.81□□□□□ -1.96
VPS52YDR484W HMG2P12684 1045 aa2.81□□□□□ -1.96
VPS52YDR484W PLC1P32383 869 aa2.81□□□□□ -1.96
VPS52YDR484W PPZ2P33329 710 aa2.81□□□□□ -1.96
VPS52YDR484W TFC4P33339 1025 aa2.81□□□□□ -1.96
VPS52YDR484W TOM20P35180 183 aa2.81□□□□□ -1.96
VPS52YDR484W PPE1P38796 400 aa2.81□□□□□ -1.96
VPS52YDR484W YEL076CP39971 216 aa2.81□□□□□ -1.96
VPS52YDR484W PMT6P42934 759 aa2.81□□□□□ -1.96
VPS52YDR484W IRC5P43610 853 aa2.81□□□□□ -1.96
VPS52YDR484W PEF1P53238 335 aa2.81□□□□□ -1.96
VPS52YDR484W NGL2Q03264 515 aaKnown RBP2.81□□□□□ -1.96
VPS52YDR484W PHM6Q05637 104 aa2.81□□□□□ -1.96
VPS52YDR484W VPS5Q92331 675 aa2.81□□□□□ -1.96
VPS52YDR484W TUP1P16649 713 aa2.8□□□□□ -1.96
VPS52YDR484W SPO11P23179 398 aa2.8□□□□□ -1.96
VPS52YDR484W ILV6P25605 309 aaKnown RBP2.8□□□□□ -1.96
VPS52YDR484W MTC7P32633 139 aa2.8□□□□□ -1.96
VPS52YDR484W ENP1P38333 483 aaKnown RBP2.8□□□□□ -1.96
VPS52YDR484W MUP3P38734 546 aa2.8□□□□□ -1.96
VPS52YDR484W YEL020CP39994 560 aa2.8□□□□□ -1.96
VPS52YDR484W IMO32P53219 342 aa2.8□□□□□ -1.96
VPS52YDR484W YGR054WP53235 642 aaKnown RBP2.8□□□□□ -1.96
VPS52YDR484W SNF12P53628 566 aa2.8□□□□□ -1.96
VPS52YDR484W MTD1Q02046 320 aaKnown RBP2.8□□□□□ -1.96
VPS52YDR484W TIM50Q02776 476 aa2.8□□□□□ -1.96
VPS52YDR484W CWC2Q12046 339 aaPredicted RBP2.8□□□□□ -1.96
VPS52YDR484W SEC12P11655 471 aa2.8□□□□□ -1.96
VPS52YDR484W CWH43P25618 953 aa2.8□□□□□ -1.96
VPS52YDR484W SSP120P39931 234 aaKnown RBP2.8□□□□□ -1.96
VPS52YDR484W MDR1P53258 950 aa2.8□□□□□ -1.96
VPS52YDR484W EFR3Q03653 782 aaKnown RBP2.8□□□□□ -1.96
VPS52YDR484W YDR179W-AQ03983 463 aa2.8□□□□□ -1.96
VPS52YDR484W COQ11Q05892 277 aa2.8□□□□□ -1.96
VPS52YDR484W ECM38Q05902 660 aaPredicted RBP2.8□□□□□ -1.96
VPS52YDR484W YOR378WQ08902 515 aa2.8□□□□□ -1.96
VPS52YDR484W SLX4Q12098 748 aa2.8□□□□□ -1.96
VPS52YDR484W SUT2Q12286 268 aa2.8□□□□□ -1.96
VPS52YDR484W MDM20Q12387 796 aaKnown RBP2.8□□□□□ -1.96
VPS52YDR484W CAP1P28495 268 aaKnown RBP2.79□□□□□ -1.96
VPS52YDR484W EMP70P32802 667 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms