RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	BUD22	Q04347	519 aa	Known RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	GFD1	Q04839	188 aa	Known RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	ERG11	P10614	530 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	PYC1	P11154	1178 aa	Known RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	ENA1	P13587	1091 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	PRE8	P23639	250 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	PRP22	P24384	1145 aa	Known RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	PTP2	P29461	750 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	TYE7	P33122	291 aa	Predicted RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	KES1	P35844	434 aa	Known RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	MAL31	P38156	614 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	RGD2	P43556	714 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	EMC2	P47133	292 aa	Known RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	YGR122W	P53272	402 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	YNL181W	P53878	407 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	ENA2	Q01896	1091 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	NSE5	Q03718	556 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	PPM1	Q04081	328 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	NSE3	Q05541	303 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	PEX30	Q06169	523 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	ARO10	Q06408	635 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	GRS2	Q06817	618 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	ENA5	Q12691	1091 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPP2B	P02400	110 aa	Known RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	HNM1	P19807	563 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	CMK2	P22517	447 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	PEP12	P32854	288 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	MEF2	P39677	819 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	SAH1	P39954	449 aa	Known RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	FIG4	P42837	879 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	YFL034W	P43564	1073 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	GUF1	P46943	645 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	BPL1	P48445	690 aa	Predicted RBP	4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	TRS120	Q04183	1289 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	MSC3	Q05812	728 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	RTR2	Q12378	196 aa		4.64	□□□□□ -1.67
YDR261C-D	YDR261C-D	STF1	P01098	86 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
YDR261C-D	YDR261C-D	NPL4	P33755	580 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	CTF13	P35203	478 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	SEA4	P38164	1038 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	UBP13	P38187	747 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	GIP4	P39732	760 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	NPA3	P47122	385 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	SPO20	Q04359	397 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	GMC1	Q04399	608 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	CNL1	Q06333	122 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	CMS1	Q07897	291 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RTT10	Q08924	1013 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	TAF10	Q12030	206 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	APC11	Q12157	165 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	DPH6	Q12429	685 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	YOR019W	Q99248	730 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	HXK1	P04806	485 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	GPA1	P08539	472 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	IMA3	P0CW40	589 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	IMA4	P0CW41	589 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPT5	P33297	434 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	GPI16	P38875	610 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	FCY21	P40039	528 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	CIT3	P43635	486 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	STB2	P46679	850 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	VTC4	P47075	721 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	INP52	P50942	1183 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	SAE3	P89114	91 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	VHS1	Q03785	461 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RVB1	Q03940	463 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	MCP2	Q06567	569 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	IMA2	Q08295	589 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	YEF3	P16521	1044 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPL8A	P17076	256 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPL8B	P29453	256 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	HMX1	P32339	317 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RRN6	P32786	894 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	AFG2	P32794	780 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	YHR219W	P38900	624 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	CCC2	P38995	1004 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPC17	P47076	161 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	ASK10	P48361	1146 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RSC4	Q02206	625 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	RLI1	Q03195	608 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	YML079W	Q03629	201 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	USA1	Q03714	838 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	BUR2	Q05949	395 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
YDR261C-D	YDR261C-D	YBL113C	Q7M4S9	792 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	ISN1	Q99312	450 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	CHD1	P32657	1468 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	CDC13	P32797	924 aa	Known RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	TIR2	P33890	251 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	PET112	P33893	541 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	SGS1	P35187	1447 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	APL2	P36000	726 aa	Predicted RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	MCX1	P38323	520 aa	Predicted RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	YHR202W	P38887	602 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	MSS4	P38994	779 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	SYG1	P40528	902 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	FET4	P40988	552 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	PAN2	P53010	1115 aa	Predicted RBP	4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	YKR005C	Q02203	525 aa		4.63	□□□□□ -1.67

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