RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	ACM1	Q08981	209 aa		5.02	□□□□□ -1.61
RVB1	YDR190C	PGK1	P00560	416 aa	Known RBP	5.01	□□□□□ -1.61
RVB1	YDR190C	HTS1	P07263	546 aa	Known RBP	5.01	□□□□□ -1.61
RVB1	YDR190C	KAR3	P17119	729 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	FPS1	P23900	669 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	GPI10	P30777	616 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	CBF2	P32504	956 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	ATG19	P35193	415 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	BLI1	P35727	113 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	TFA2	P36145	328 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	RCK2	P38623	610 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	PRK1	P40494	810 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	AVT1	P47082	602 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	COS5	P47187	383 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	TAM41	P53230	385 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	TPO2	P53283	614 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	YNR065C	P53751	1116 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	ESBP6	P53918	673 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	SHE9	Q04172	456 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	TDA9	Q04545	1251 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	YDR338C	Q05497	695 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	PHM6	Q05637	104 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	PIG1	Q06216	648 aa		5.01	□□□□□ -1.61
RVB1	YDR190C	CDC33	P07260	213 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	IME1	P21190	360 aa		5	□□□□□ -1.61
RVB1	YDR190C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
RVB1	YDR190C	DAL2	P25335	343 aa		5	□□□□□ -1.61
RVB1	YDR190C	SBA1	P28707	216 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	KIP1	P28742	1111 aa		5	□□□□□ -1.61
RVB1	YDR190C	MUD1	P32605	298 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	YSC83	P32792	385 aa		5	□□□□□ -1.61
RVB1	YDR190C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
RVB1	YDR190C	MRP8	P35719	219 aa		5	□□□□□ -1.61
RVB1	YDR190C	HIS2	P38635	335 aa		5	□□□□□ -1.61
RVB1	YDR190C	SMX2	P40204	77 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	DSN1	P40568	576 aa		5	□□□□□ -1.61
RVB1	YDR190C	SAP185	P40856	1058 aa		5	□□□□□ -1.61
RVB1	YDR190C	LEM3	P42838	414 aa		5	□□□□□ -1.61
RVB1	YDR190C	RPS0B	P46654	252 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	URB2	P47108	1174 aa		5	□□□□□ -1.61
RVB1	YDR190C	CPR6	P53691	371 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	SQS1	P53866	767 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	UTP6	Q02354	440 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	YMR187C	Q03236	431 aa		5	□□□□□ -1.61
RVB1	YDR190C	DUS3	Q06053	668 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	FLC1	Q08967	793 aa		5	□□□□□ -1.61
RVB1	YDR190C	RIO1	Q12196	484 aa	Known RBP	5	□□□□□ -1.61
RVB1	YDR190C	TCP1	P12612	559 aa	Known RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	POL3	P15436	1097 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	PRP16	P15938	1071 aa	Predicted RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	CBF1	P17106	351 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
RVB1	YDR190C	CAP1	P28495	268 aa	Known RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	PEX2	P32800	271 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	MCR1	P36060	302 aa	Known RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	YBR184W	P38299	523 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	TIF5	P38431	405 aa	Known RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	YHR020W	P38708	688 aa	Known RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	IRR1	P40541	1150 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	LSB6	P42951	607 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	HSH155	P49955	971 aa	Known RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	CUZ1	P53899	274 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	PTA1	Q01329	785 aa	Predicted RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	TY1A-DR2	Q03964	440 aa	Known RBP	4.99	□□□□□ -1.61
RVB1	YDR190C	TY1A-MR1	Q04215	440 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	TAF9	Q05027	157 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	SPH1	Q06160	661 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	CUR1	Q06469	252 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	UBX5	Q06682	500 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	REC8	Q12188	680 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	YDR461C-A	Q2V2P7	80 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	SEY1	Q99287	776 aa		4.99	□□□□□ -1.61
RVB1	YDR190C	MRP10	O75012	95 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	DED1	P06634	604 aa	Known RBP	4.98	□□□□□ -1.61
RVB1	YDR190C	SNF1	P06782	633 aa	Known RBP	4.98	□□□□□ -1.61
RVB1	YDR190C	ARG1	P22768	420 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RVB1	YDR190C	PLC1	P32383	869 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	GYP6	P32806	458 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	STE5	P32917	917 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	YBL055C	P34220	418 aa	Predicted RBP	4.98	□□□□□ -1.61
RVB1	YDR190C	MRX3	P38172	270 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	YBR062C	P38239	180 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	YBP1	P38315	674 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	GGA2	P38817	585 aa	Known RBP	4.98	□□□□□ -1.61
RVB1	YDR190C	PNT1	P38969	423 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	SAK1	P38990	1142 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	END3	P39013	349 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	RSP5	P39940	809 aa	Known RBP	4.98	□□□□□ -1.61
RVB1	YDR190C	MRX1	P40050	688 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	ASG1	P40467	964 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	INA22	P40576	216 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	DAS1	P47005	663 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	VPS53	P47061	822 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	YJR039W	P47107	1121 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	YGR125W	P53273	1036 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	ZPR1	P53303	486 aa	Known RBP	4.98	□□□□□ -1.61
RVB1	YDR190C	ADE12	P80210	433 aa	Known RBP	4.98	□□□□□ -1.61
RVB1	YDR190C	ROD1	Q02805	837 aa		4.98	□□□□□ -1.61
RVB1	YDR190C	YDR222W	Q04925	415 aa		4.98	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 83.8 ms