RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C RTT102P53330 157 aa1.57□□□□□ -2.16
MSH3YCR092C BNI5P53890 448 aaKnown RBP1.57□□□□□ -2.16
MSH3YCR092C LCD1Q04377 747 aa1.57□□□□□ -2.16
MSH3YCR092C RTN1Q04947 295 aaKnown RBP1.57□□□□□ -2.16
MSH3YCR092C HBT1Q07653 1046 aaKnown RBP1.57□□□□□ -2.16
MSH3YCR092C XYL2Q07993 356 aa1.57□□□□□ -2.16
MSH3YCR092C COX4P04037 155 aa1.57□□□□□ -2.16
MSH3YCR092C CYC8P14922 966 aa1.57□□□□□ -2.16
MSH3YCR092C RPC31P17890 251 aa1.57□□□□□ -2.16
MSH3YCR092C PPZ1P26570 692 aa1.57□□□□□ -2.16
MSH3YCR092C ALG3P38179 458 aa1.57□□□□□ -2.16
MSH3YCR092C YHL041WP38730 149 aa1.57□□□□□ -2.16
MSH3YCR092C PIK1P39104 1066 aa1.57□□□□□ -2.16
MSH3YCR092C YIR042CP40586 236 aa1.57□□□□□ -2.16
MSH3YCR092C ACS2P52910 683 aaKnown RBP1.57□□□□□ -2.16
MSH3YCR092C TEL2P53038 688 aa1.57□□□□□ -2.16
MSH3YCR092C PEX31P53203 462 aa1.57□□□□□ -2.16
MSH3YCR092C DSE4P53753 1117 aa1.57□□□□□ -2.16
MSH3YCR092C ESBP6P53918 673 aa1.57□□□□□ -2.16
MSH3YCR092C STP1Q00947 519 aa1.57□□□□□ -2.16
MSH3YCR092C HOS3Q02959 697 aaKnown RBP1.57□□□□□ -2.16
MSH3YCR092C YPL113CQ02961 396 aa1.57□□□□□ -2.16
MSH3YCR092C YDR131CQ03899 556 aa1.57□□□□□ -2.16
MSH3YCR092C EMI2Q04409 500 aaKnown RBP1.57□□□□□ -2.16
MSH3YCR092C BNA5Q05979 453 aa1.57□□□□□ -2.16
MSH3YCR092C YLR012CQ07927 99 aa1.57□□□□□ -2.16
MSH3YCR092C NBA1Q08229 501 aaKnown RBP1.57□□□□□ -2.16
MSH3YCR092C ETT1Q08421 412 aaKnown RBP1.57□□□□□ -2.16
MSH3YCR092C MCD1Q12158 566 aa1.57□□□□□ -2.16
MSH3YCR092C GTT2Q12390 233 aa1.57□□□□□ -2.16
MSH3YCR092C VPS5Q92331 675 aa1.57□□□□□ -2.16
MSH3YCR092C FRT1Q99332 602 aa1.57□□□□□ -2.16
MSH3YCR092C FRS2P15625 503 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C SCL1P21243 252 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C BUD14P27637 709 aa1.56□□□□□ -2.16
MSH3YCR092C NTH1P32356 751 aa1.56□□□□□ -2.16
MSH3YCR092C HIR1P32479 840 aa1.56□□□□□ -2.16
MSH3YCR092C ISC10P32645 267 aa1.56□□□□□ -2.16
MSH3YCR092C NOP4P37838 685 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C UBP13P38187 747 aa1.56□□□□□ -2.16
MSH3YCR092C MUM2P38236 366 aa1.56□□□□□ -2.16
MSH3YCR092C SUL1P38359 859 aa1.56□□□□□ -2.16
MSH3YCR092C APM2P38700 605 aa1.56□□□□□ -2.16
MSH3YCR092C CCC2P38995 1004 aa1.56□□□□□ -2.16
MSH3YCR092C STT3P39007 718 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C RMD8P43620 662 aa1.56□□□□□ -2.16
MSH3YCR092C YTP1P53584 459 aa1.56□□□□□ -2.16
MSH3YCR092C YNR040WP53736 256 aa1.56□□□□□ -2.16
MSH3YCR092C YNL247WP53852 767 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C YNL146WP53906 100 aa1.56□□□□□ -2.16
MSH3YCR092C YDL121CQ07541 149 aa1.56□□□□□ -2.16
MSH3YCR092C RGT2Q12300 763 aa1.56□□□□□ -2.16
MSH3YCR092C MED1Q12321 566 aa1.56□□□□□ -2.16
MSH3YCR092C SAM1P10659 382 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C BIK1P11709 440 aa1.56□□□□□ -2.16
MSH3YCR092C RRT12P25381 491 aa1.56□□□□□ -2.16
MSH3YCR092C ADK2P26364 225 aa1.56□□□□□ -2.16
MSH3YCR092C CCR4P31384 837 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C SFA1P32771 386 aa1.56□□□□□ -2.16
MSH3YCR092C TKL2P33315 681 aa1.56□□□□□ -2.16
MSH3YCR092C TAF14P35189 244 aa1.56□□□□□ -2.16
MSH3YCR092C PXL1P36166 706 aa1.56□□□□□ -2.16
MSH3YCR092C CCL1P37366 393 aa1.56□□□□□ -2.16
MSH3YCR092C YHL008CP38750 627 aa1.56□□□□□ -2.16
MSH3YCR092C CHS7P38843 316 aa1.56□□□□□ -2.16
MSH3YCR092C NUP60P39705 539 aa1.56□□□□□ -2.16
MSH3YCR092C SIP5P40210 489 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C TMA108P40462 946 aa1.56□□□□□ -2.16
MSH3YCR092C SET2P46995 733 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C CTF18P49956 741 aa1.56□□□□□ -2.16
MSH3YCR092C YKE2P52553 114 aa1.56□□□□□ -2.16
MSH3YCR092C ARI1P53111 347 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C COP1P53622 1201 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C NCS2P53923 493 aaPredicted RBP1.56□□□□□ -2.16
MSH3YCR092C SFB2P53953 876 aa1.56□□□□□ -2.16
MSH3YCR092C RHO3Q00245 231 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C YDR338CQ05497 695 aa1.56□□□□□ -2.16
MSH3YCR092C GIC2Q06648 383 aa1.56□□□□□ -2.16
MSH3YCR092C LEA1Q08963 238 aaPredicted RBP1.56□□□□□ -2.16
MSH3YCR092C YOR022CQ12204 715 aa1.56□□□□□ -2.16
MSH3YCR092C LSP1Q12230 341 aaKnown RBP1.56□□□□□ -2.16
MSH3YCR092C DED1P06634 604 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C AEP2P22136 580 aa1.55□□□□□ -2.16
MSH3YCR092C ERG6P25087 383 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C SWI4P25302 1093 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C PHO11P35842 467 aa1.55□□□□□ -2.16
MSH3YCR092C KAP104P38217 918 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C PHO12P38693 467 aa1.55□□□□□ -2.16
MSH3YCR092C MPT5P39016 859 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
MSH3YCR092C DHH1P39517 506 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C GIP2P40036 548 aa1.55□□□□□ -2.16
MSH3YCR092C YGL140CP53120 1219 aa1.55□□□□□ -2.16
MSH3YCR092C JJJ1P53863 590 aa1.55□□□□□ -2.16
MSH3YCR092C TEP1P53916 434 aa1.55□□□□□ -2.16
MSH3YCR092C ALG11P53954 548 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C RCR2Q03446 210 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C YCG1Q06680 1035 aa1.55□□□□□ -2.16
MSH3YCR092C PEX19Q07418 342 aa1.55□□□□□ -2.16
MSH3YCR092C YOR296WQ08748 1289 aa1.55□□□□□ -2.16
MSH3YCR092C YPL277CQ08989 487 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms